Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACTBP60709 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.18□□□□□ -0.46
ACTBP60709 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
ACTBP60709 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACTBP60709 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACTBP60709 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACTBP60709 ACKR1-201ENST00000368121 1240 ntBASIC12.18□□□□□ -0.46
ACTBP60709 AC098614.1-201ENST00000368528 745 ntBASIC12.18□□□□□ -0.46
ACTBP60709 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.18□□□□□ -0.46
ACTBP60709 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.18□□□□□ -0.46
ACTBP60709 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ACTBP60709 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.18□□□□□ -0.46
ACTBP60709 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.18□□□□□ -0.46
ACTBP60709 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.18□□□□□ -0.46
ACTBP60709 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ACTBP60709 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.18□□□□□ -0.46
ACTBP60709 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.18□□□□□ -0.46
ACTBP60709 AC009486.1-201ENST00000569860 813 ntBASIC12.18□□□□□ -0.46
ACTBP60709 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.18□□□□□ -0.46
ACTBP60709 CLUHP6-201ENST00000580789 941 ntBASIC12.18□□□□□ -0.46
ACTBP60709 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.18□□□□□ -0.46
ACTBP60709 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ACTBP60709 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.18□□□□□ -0.46
ACTBP60709 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.18□□□□□ -0.46
ACTBP60709 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ACTBP60709 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.18□□□□□ -0.46
ACTBP60709 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.18□□□□□ -0.46
ACTBP60709 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACTBP60709 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACTBP60709 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACTBP60709 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACTBP60709 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
ACTBP60709 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
ACTBP60709 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.18□□□□□ -0.46
ACTBP60709 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.18□□□□□ -0.46
ACTBP60709 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACTBP60709 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ACTBP60709 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.18□□□□□ -0.46
ACTBP60709 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ACTBP60709 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.18□□□□□ -0.46
ACTBP60709 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACTBP60709 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC12.18□□□□□ -0.46
ACTBP60709 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACTBP60709 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.18□□□□□ -0.46
ACTBP60709 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.18□□□□□ -0.46
ACTBP60709 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACTBP60709 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ACTBP60709 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
ACTBP60709 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
ACTBP60709 PCDHB19P-202ENST00000625133 2914 ntBASIC12.17□□□□□ -0.46
ACTBP60709 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.17□□□□□ -0.46
ACTBP60709 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
ACTBP60709 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
ACTBP60709 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
ACTBP60709 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 CLUHP2-201ENST00000426660 1303 ntBASIC12.17□□□□□ -0.46
ACTBP60709 FKBP4P6-201ENST00000457486 1332 ntBASIC12.17□□□□□ -0.46
ACTBP60709 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
ACTBP60709 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
ACTBP60709 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
ACTBP60709 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.17□□□□□ -0.46
ACTBP60709 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.17□□□□□ -0.46
ACTBP60709 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.17□□□□□ -0.46
ACTBP60709 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
ACTBP60709 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.17□□□□□ -0.46
ACTBP60709 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
ACTBP60709 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 FTLP10-202ENST00000505798 471 ntBASIC12.17□□□□□ -0.46
ACTBP60709 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.17□□□□□ -0.46
ACTBP60709 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.17□□□□□ -0.46
ACTBP60709 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
ACTBP60709 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.17□□□□□ -0.46
ACTBP60709 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
ACTBP60709 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
ACTBP60709 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.17□□□□□ -0.46
ACTBP60709 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.17□□□□□ -0.46
ACTBP60709 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.17□□□□□ -0.46
ACTBP60709 MIR3197-201ENST00000582241 73 ntBASIC12.17□□□□□ -0.46
ACTBP60709 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.17□□□□□ -0.46
ACTBP60709 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.17□□□□□ -0.46
ACTBP60709 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.17□□□□□ -0.46
ACTBP60709 LINC02084-201ENST00000606069 1096 ntBASIC12.17□□□□□ -0.46
ACTBP60709 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 AC138466.3-201ENST00000619983 221 ntBASIC12.17□□□□□ -0.46
ACTBP60709 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms