Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC12.65□□□□□ -0.38
Col1a1P11087 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col1a1P11087 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC12.65□□□□□ -0.38
Col1a1P11087 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC12.65□□□□□ -0.38
Col1a1P11087 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Col1a1P11087 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col1a1P11087 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col1a1P11087 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col1a1P11087 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col1a1P11087 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Col1a1P11087 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col1a1P11087 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col1a1P11087 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col1a1P11087 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col1a1P11087 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.64□□□□□ -0.39
Col1a1P11087 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col1a1P11087 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col1a1P11087 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col1a1P11087 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.64□□□□□ -0.39
Col1a1P11087 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col1a1P11087 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col1a1P11087 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col1a1P11087 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col1a1P11087 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col1a1P11087 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col1a1P11087 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Col1a1P11087 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Col1a1P11087 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
Col1a1P11087 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC12.64□□□□□ -0.39
Col1a1P11087 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC12.64□□□□□ -0.39
Col1a1P11087 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC12.64□□□□□ -0.39
Col1a1P11087 Gm5766-202ENSMUST00000161633 799 ntBASIC12.64□□□□□ -0.39
Col1a1P11087 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC12.64□□□□□ -0.39
Col1a1P11087 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col1a1P11087 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC12.64□□□□□ -0.39
Col1a1P11087 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC12.64□□□□□ -0.39
Col1a1P11087 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col1a1P11087 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col1a1P11087 Gm26440-201ENSMUST00000082591 129 ntBASIC12.64□□□□□ -0.39
Col1a1P11087 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col1a1P11087 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col1a1P11087 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col1a1P11087 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col1a1P11087 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Col1a1P11087 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Col1a1P11087 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col1a1P11087 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Col1a1P11087 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Col1a1P11087 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.63□□□□□ -0.39
Col1a1P11087 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Col1a1P11087 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.63□□□□□ -0.39
Col1a1P11087 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.63□□□□□ -0.39
Col1a1P11087 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC12.63□□□□□ -0.39
Col1a1P11087 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC12.63□□□□□ -0.39
Col1a1P11087 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC12.63□□□□□ -0.39
Col1a1P11087 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC12.63□□□□□ -0.39
Col1a1P11087 Gm28391-201ENSMUST00000185202 379 ntBASIC12.63□□□□□ -0.39
Col1a1P11087 Gm29528-201ENSMUST00000186699 379 ntBASIC12.63□□□□□ -0.39
Col1a1P11087 Gm29526-201ENSMUST00000187217 379 ntBASIC12.63□□□□□ -0.39
Col1a1P11087 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Gm5543-201ENSMUST00000193329 1091 ntBASIC12.63□□□□□ -0.39
Col1a1P11087 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Gm18391-201ENSMUST00000217189 658 ntBASIC12.63□□□□□ -0.39
Col1a1P11087 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC12.63□□□□□ -0.39
Col1a1P11087 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Col1a1P11087 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col1a1P11087 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col1a1P11087 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col1a1P11087 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col1a1P11087 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col1a1P11087 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col1a1P11087 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col1a1P11087 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC12.63□□□□□ -0.39
Col1a1P11087 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms