Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Gm15881-201ENSMUST00000148792 942 ntBASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Gm7985-201ENSMUST00000183329 981 ntBASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Gm4797-201ENSMUST00000219075 1283 ntBASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 AC154436.1-201ENSMUST00000227272 782 ntBASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 AC159103.1-201ENSMUST00000228325 429 ntBASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Gm19165-201ENSMUST00000204453 1982 ntBASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 AC158355.1-201ENSMUST00000215895 1705 ntBASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Pdlim5Q8CI51 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Gm12136-201ENSMUST00000120460 1209 ntBASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Gm12566-201ENSMUST00000121479 359 ntBASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Gm25226-201ENSMUST00000158198 123 ntBASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Snord55-201ENSMUST00000174939 79 ntBASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Gm8197-202ENSMUST00000193422 934 ntBASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Gm5599-201ENSMUST00000209602 788 ntBASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Gm6768-201ENSMUST00000022467 1878 ntBASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 AC154257.1-202ENSMUST00000224729 843 ntBASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 AC122035.1-201ENSMUST00000227576 1016 ntBASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim5Q8CI51 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.8
Pdlim5Q8CI51 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Pdlim5Q8CI51 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Pdlim5Q8CI51 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Pdlim5Q8CI51 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Pdlim5Q8CI51 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Pdlim5Q8CI51 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Pdlim5Q8CI51 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.02□□□□□ -0.8
Pdlim5Q8CI51 Gm5308-201ENSMUST00000196752 1354 ntBASIC10.02□□□□□ -0.8
Pdlim5Q8CI51 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Pdlim5Q8CI51 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC10.02□□□□□ -0.8
Pdlim5Q8CI51 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC10.02□□□□□ -0.8
Pdlim5Q8CI51 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.8
Pdlim5Q8CI51 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Pdlim5Q8CI51 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pdlim5Q8CI51 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pdlim5Q8CI51 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pdlim5Q8CI51 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pdlim5Q8CI51 Gm42851-201ENSMUST00000201325 1411 ntBASIC10.02□□□□□ -0.81
Pdlim5Q8CI51 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Pdlim5Q8CI51 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Pdlim5Q8CI51 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms