Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Rorc-201ENSMUST00000029795 2136 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Ccdc138-201ENSMUST00000036576 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Myo1a-201ENSMUST00000079590 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Slc22a13-201ENSMUST00000084797 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Fancb-202ENSMUST00000101082 2980 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 AC158777.1-201ENSMUST00000226216 1724 ntBASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 AC122881.1-201ENSMUST00000225757 2695 ntBASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Gm24255-201ENSMUST00000104481 128 ntBASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Gm14592-201ENSMUST00000117201 560 ntBASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Gm13392-201ENSMUST00000117708 150 ntBASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Gm12380-201ENSMUST00000119012 544 ntBASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Gm15329-201ENSMUST00000121408 155 ntBASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Gm15549-201ENSMUST00000121595 622 ntBASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Gm18734-201ENSMUST00000172937 808 ntBASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Gm27530-201ENSMUST00000184096 98 ntBASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Gm45433-201ENSMUST00000209386 247 ntBASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Slc28a1-202ENSMUST00000119083 2899 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Ilf3-201ENSMUST00000067646 3549 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Drc3-204ENSMUST00000108723 1917 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Entpd1-204ENSMUST00000134063 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Capn3-202ENSMUST00000028749 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Ccdc28bQ8CEG5 4933414I15Rik-201ENSMUST00000109123 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Gm16630-201ENSMUST00000180741 3257 ntTSL 5 BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Gm14372-201ENSMUST00000125355 2193 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Gm7932-202ENSMUST00000205047 2194 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Gm13916-201ENSMUST00000117368 628 ntBASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Gm15711-201ENSMUST00000118889 535 ntBASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Tspan2-202ENSMUST00000119902 961 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Gm13263-201ENSMUST00000121271 838 ntBASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Gm28032-201ENSMUST00000184104 96 ntBASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms