Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Gm3551-201ENSMUST00000190750 664 ntBASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Gm43916-201ENSMUST00000205062 967 ntBASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Gm5599-201ENSMUST00000209602 788 ntBASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Gm38054-201ENSMUST00000192380 2167 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Hyal2-206ENSMUST00000195681 2968 ntBASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Gm6768-201ENSMUST00000022467 1878 ntBASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Gm12986-201ENSMUST00000119037 967 ntBASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Gm15432-201ENSMUST00000121106 195 ntBASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Gm7255-201ENSMUST00000187371 908 ntBASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Mt1-202ENSMUST00000211807 1085 ntBASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Gm15953-201ENSMUST00000117656 1732 ntBASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc38Q8CDN8 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms