Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-3P97334 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-3P97334 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-3P97334 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-3P97334 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-3P97334 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-3P97334 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-3P97334 AC159810.1-201ENSMUST00000214838 1480 ntBASIC13.73□□□□□ -0.21
Nkx2-3P97334 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-3P97334 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-3P97334 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-3P97334 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-3P97334 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-3P97334 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Nkx2-3P97334 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-3P97334 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC13.73□□□□□ -0.21
Nkx2-3P97334 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-3P97334 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Nkx2-3P97334 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC13.72□□□□□ -0.21
Nkx2-3P97334 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Nkx2-3P97334 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC13.72□□□□□ -0.21
Nkx2-3P97334 Gm14539-201ENSMUST00000117527 174 ntBASIC13.72□□□□□ -0.21
Nkx2-3P97334 Gm14176-201ENSMUST00000121302 477 ntBASIC13.72□□□□□ -0.21
Nkx2-3P97334 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Gm16305-201ENSMUST00000140747 556 ntBASIC13.72□□□□□ -0.21
Nkx2-3P97334 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Gm20091-201ENSMUST00000179683 189 ntBASIC13.72□□□□□ -0.21
Nkx2-3P97334 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Gm5543-201ENSMUST00000193329 1091 ntBASIC13.72□□□□□ -0.21
Nkx2-3P97334 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Gm8796-201ENSMUST00000219122 936 ntBASIC13.72□□□□□ -0.21
Nkx2-3P97334 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Gm13169-201ENSMUST00000122090 1459 ntBASIC13.72□□□□□ -0.21
Nkx2-3P97334 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.72□□□□□ -0.21
Nkx2-3P97334 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC13.72□□□□□ -0.21
Nkx2-3P97334 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.72□□□□□ -0.21
Nkx2-3P97334 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-3P97334 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Nkx2-3P97334 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Nkx2-3P97334 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Nkx2-3P97334 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-3P97334 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-3P97334 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Nkx2-3P97334 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-3P97334 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-3P97334 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-3P97334 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-3P97334 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-3P97334 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Nkx2-3P97334 Gm11235-201ENSMUST00000117763 333 ntBASIC13.71□□□□□ -0.21
Nkx2-3P97334 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC13.71□□□□□ -0.21
Nkx2-3P97334 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC13.71□□□□□ -0.21
Nkx2-3P97334 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-3P97334 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-3P97334 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
Nkx2-3P97334 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Nkx2-3P97334 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Nkx2-3P97334 Gm5274-201ENSMUST00000182641 1003 ntBASIC13.71□□□□□ -0.21
Nkx2-3P97334 Gm7833-201ENSMUST00000183288 990 ntBASIC13.71□□□□□ -0.21
Nkx2-3P97334 Hyal2-206ENSMUST00000195681 2968 ntBASIC13.71□□□□□ -0.21
Nkx2-3P97334 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC13.71□□□□□ -0.21
Nkx2-3P97334 Gm30055-201ENSMUST00000203175 803 ntBASIC13.71□□□□□ -0.21
Nkx2-3P97334 AC140314.1-201ENSMUST00000219549 554 ntBASIC13.71□□□□□ -0.21
Nkx2-3P97334 Atf7-201ENSMUST00000096143 390 ntBASIC13.71□□□□□ -0.21
Nkx2-3P97334 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-3P97334 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-3P97334 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-3P97334 Gm45719-201ENSMUST00000207954 1662 ntBASIC13.71□□□□□ -0.21
Nkx2-3P97334 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx2-3P97334 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx2-3P97334 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx2-3P97334 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx2-3P97334 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
Nkx2-3P97334 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-3P97334 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC13.7□□□□□ -0.22
Nkx2-3P97334 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-3P97334 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nkx2-3P97334 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms