Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Lmo4P61969 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC8.84□□□□□ -1
Lmo4P61969 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -1
Lmo4P61969 AC124732.3-201ENSMUST00000221835 1765 ntBASIC8.84□□□□□ -1
Lmo4P61969 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Gm21136-201ENSMUST00000186812 2575 ntBASIC8.83□□□□□ -1
Lmo4P61969 Gm6605-201ENSMUST00000031488 2574 ntBASIC8.83□□□□□ -1
Lmo4P61969 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC8.83□□□□□ -1
Lmo4P61969 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC8.83□□□□□ -1
Lmo4P61969 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC8.83□□□□□ -1
Lmo4P61969 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Gm45124-201ENSMUST00000206723 2755 ntBASIC8.83□□□□□ -1
Lmo4P61969 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Lmo4P61969 Gm23769-201ENSMUST00000104441 121 ntBASIC8.83□□□□□ -1
Lmo4P61969 Gm6441-201ENSMUST00000120983 696 ntBASIC8.83□□□□□ -1
Lmo4P61969 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC8.83□□□□□ -1
Lmo4P61969 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC8.83□□□□□ -1
Lmo4P61969 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC8.83□□□□□ -1
Lmo4P61969 Gm26313-201ENSMUST00000157770 308 ntBASIC8.83□□□□□ -1
Lmo4P61969 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
Lmo4P61969 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
Lmo4P61969 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Gm8601-201ENSMUST00000182096 909 ntBASIC8.83□□□□□ -1
Lmo4P61969 Gm7572-201ENSMUST00000182616 766 ntBASIC8.83□□□□□ -1
Lmo4P61969 Gm27316-201ENSMUST00000184884 277 ntBASIC8.83□□□□□ -1
Lmo4P61969 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Gm38313-201ENSMUST00000191953 1266 ntBASIC8.83□□□□□ -1
Lmo4P61969 Gm37207-201ENSMUST00000194284 296 ntBASIC8.83□□□□□ -1
Lmo4P61969 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC8.83□□□□□ -1
Lmo4P61969 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 AC155300.1-201ENSMUST00000219134 480 ntBASIC8.83□□□□□ -1
Lmo4P61969 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Lmo4P61969 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC8.83□□□□□ -1
Lmo4P61969 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC8.83□□□□□ -1
Lmo4P61969 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC8.83□□□□□ -1
Lmo4P61969 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 AC149588.2-201ENSMUST00000228182 1859 ntBASIC8.83□□□□□ -1
Lmo4P61969 Pck2-205ENSMUST00000226352 2784 ntBASIC8.83□□□□□ -1
Lmo4P61969 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Lmo4P61969 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Lmo4P61969 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC8.82□□□□□ -1
Lmo4P61969 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC8.82□□□□□ -1
Lmo4P61969 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC8.82□□□□□ -1
Lmo4P61969 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC8.82□□□□□ -1
Lmo4P61969 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC8.82□□□□□ -1
Lmo4P61969 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Gm29358-202ENSMUST00000187941 3227 ntBASIC8.82□□□□□ -1
Lmo4P61969 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC8.82□□□□□ -1
Lmo4P61969 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC8.82□□□□□ -1
Lmo4P61969 Gm12028-201ENSMUST00000118065 436 ntBASIC8.82□□□□□ -1
Lmo4P61969 Gm8019-201ENSMUST00000119317 587 ntBASIC8.82□□□□□ -1
Lmo4P61969 Gm15031-201ENSMUST00000121341 210 ntBASIC8.82□□□□□ -1
Lmo4P61969 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Gm6425-201ENSMUST00000136332 790 ntBASIC8.82□□□□□ -1
Lmo4P61969 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Gm13857-201ENSMUST00000139645 173 ntBASIC8.82□□□□□ -1
Lmo4P61969 Gm26368-201ENSMUST00000157826 118 ntBASIC8.82□□□□□ -1
Lmo4P61969 Gm9574-201ENSMUST00000173127 845 ntBASIC8.82□□□□□ -1
Lmo4P61969 Gm7928-201ENSMUST00000181249 701 ntBASIC8.82□□□□□ -1
Lmo4P61969 Gm8384-201ENSMUST00000190905 704 ntBASIC8.82□□□□□ -1
Lmo4P61969 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC8.82□□□□□ -1
Lmo4P61969 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms