Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf6Q9DBU5 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf6Q9DBU5 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf6Q9DBU5 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf6Q9DBU5 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf6Q9DBU5 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf6Q9DBU5 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf6Q9DBU5 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf6Q9DBU5 Gm45041-201ENSMUST00000207366 3108 ntBASIC11.74□□□□□ -0.53
Rnf6Q9DBU5 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.74□□□□□ -0.53
Rnf6Q9DBU5 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf6Q9DBU5 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf6Q9DBU5 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf6Q9DBU5 Gm28624-201ENSMUST00000186430 2131 ntBASIC11.74□□□□□ -0.53
Rnf6Q9DBU5 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf6Q9DBU5 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rnf6Q9DBU5 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf6Q9DBU5 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Rnf6Q9DBU5 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf6Q9DBU5 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rnf6Q9DBU5 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf6Q9DBU5 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf6Q9DBU5 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Mir453-201ENSMUST00000104732 82 ntBASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Gm5944-201ENSMUST00000118182 1001 ntBASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Gm13888-201ENSMUST00000119148 422 ntBASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Gm13117-201ENSMUST00000120894 691 ntBASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Gm25226-201ENSMUST00000158198 123 ntBASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Gm5210-201ENSMUST00000182150 1010 ntBASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Gm3508-201ENSMUST00000186012 792 ntBASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Gm28388-201ENSMUST00000186262 437 ntBASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Gm8531-201ENSMUST00000188319 893 ntBASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Gm44126-201ENSMUST00000204831 514 ntBASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 AC154305.2-201ENSMUST00000225813 901 ntBASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 AC134793.1-202ENSMUST00000227444 803 ntBASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf6Q9DBU5 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 Gm10169-201ENSMUST00000121822 348 ntBASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 Gm7047-201ENSMUST00000196224 1063 ntBASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 Gm43671-201ENSMUST00000200422 433 ntBASIC11.72□□□□□ -0.53
Rnf6Q9DBU5 Gm5051-201ENSMUST00000204085 485 ntBASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms