Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm5538W4VSP6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.61■□□□□ 0.89
Gm5538W4VSP6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Gm5538W4VSP6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Gm5538W4VSP6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Gm5538W4VSP6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm5538W4VSP6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Gm5538W4VSP6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm5538W4VSP6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gm5538W4VSP6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gm5538W4VSP6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Gm5538W4VSP6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm5538W4VSP6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm5538W4VSP6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Gm5538W4VSP6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Gm5538W4VSP6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm5538W4VSP6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
Gm5538W4VSP6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm5538W4VSP6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Gm5538W4VSP6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.58■□□□□ 0.89
Gm5538W4VSP6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm5538W4VSP6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm5538W4VSP6 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.58■□□□□ 0.88
Gm5538W4VSP6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm5538W4VSP6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm5538W4VSP6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Gm5538W4VSP6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Gm5538W4VSP6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.57■□□□□ 0.88
Gm5538W4VSP6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gm5538W4VSP6 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.57■□□□□ 0.88
Gm5538W4VSP6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm5538W4VSP6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.57■□□□□ 0.88
Gm5538W4VSP6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm5538W4VSP6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5538W4VSP6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5538W4VSP6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5538W4VSP6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5538W4VSP6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5538W4VSP6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5538W4VSP6 Golgb1-201ENSMUST00000023534 498 ntBASIC20.56■□□□□ 0.88
Gm5538W4VSP6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5538W4VSP6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5538W4VSP6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5538W4VSP6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5538W4VSP6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5538W4VSP6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.55■□□□□ 0.88
Gm5538W4VSP6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Gm5538W4VSP6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm5538W4VSP6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm5538W4VSP6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm5538W4VSP6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Gm5538W4VSP6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm5538W4VSP6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm5538W4VSP6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.54■□□□□ 0.88
Gm5538W4VSP6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm5538W4VSP6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm5538W4VSP6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.54■□□□□ 0.88
Gm5538W4VSP6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gm5538W4VSP6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm5538W4VSP6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5538W4VSP6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5538W4VSP6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5538W4VSP6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Gm5538W4VSP6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.53■□□□□ 0.88
Gm5538W4VSP6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5538W4VSP6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.53■□□□□ 0.88
Gm5538W4VSP6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Gm5538W4VSP6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5538W4VSP6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5538W4VSP6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5538W4VSP6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5538W4VSP6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5538W4VSP6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gm5538W4VSP6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.52■□□□□ 0.88
Gm5538W4VSP6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Gm5538W4VSP6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Gm5538W4VSP6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gm5538W4VSP6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.52■□□□□ 0.88
Gm5538W4VSP6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Gm5538W4VSP6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gm5538W4VSP6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm5538W4VSP6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm5538W4VSP6 Gm12922-201ENSMUST00000120626 809 ntBASIC20.51■□□□□ 0.87
Gm5538W4VSP6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm5538W4VSP6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm5538W4VSP6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm5538W4VSP6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Gm5538W4VSP6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5538W4VSP6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5538W4VSP6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5538W4VSP6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Gm5538W4VSP6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5538W4VSP6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5538W4VSP6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5538W4VSP6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Gm5538W4VSP6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5538W4VSP6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.5■□□□□ 0.87
Gm5538W4VSP6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5538W4VSP6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5538W4VSP6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms