Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcb1Q9Z0H3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
Smarcb1Q9Z0H3 Smad6-203ENSMUST00000179458 273 ntBASIC20.97■□□□□ 0.95
Smarcb1Q9Z0H3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.97■□□□□ 0.95
Smarcb1Q9Z0H3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcb1Q9Z0H3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcb1Q9Z0H3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcb1Q9Z0H3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcb1Q9Z0H3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcb1Q9Z0H3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.96■□□□□ 0.95
Smarcb1Q9Z0H3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcb1Q9Z0H3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.96■□□□□ 0.95
Smarcb1Q9Z0H3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.96■□□□□ 0.95
Smarcb1Q9Z0H3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcb1Q9Z0H3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Smarcb1Q9Z0H3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smarcb1Q9Z0H3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.95■□□□□ 0.94
Smarcb1Q9Z0H3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.95■□□□□ 0.94
Smarcb1Q9Z0H3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Smarcb1Q9Z0H3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Smarcb1Q9Z0H3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.94■□□□□ 0.94
Smarcb1Q9Z0H3 Gm43060-201ENSMUST00000200621 289 ntBASIC20.94■□□□□ 0.94
Smarcb1Q9Z0H3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.94■□□□□ 0.94
Smarcb1Q9Z0H3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcb1Q9Z0H3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcb1Q9Z0H3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcb1Q9Z0H3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarcb1Q9Z0H3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Smarcb1Q9Z0H3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarcb1Q9Z0H3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarcb1Q9Z0H3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.93■□□□□ 0.94
Smarcb1Q9Z0H3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarcb1Q9Z0H3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarcb1Q9Z0H3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarcb1Q9Z0H3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcb1Q9Z0H3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcb1Q9Z0H3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcb1Q9Z0H3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcb1Q9Z0H3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcb1Q9Z0H3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcb1Q9Z0H3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Smarcb1Q9Z0H3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcb1Q9Z0H3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.92■□□□□ 0.94
Smarcb1Q9Z0H3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.92■□□□□ 0.94
Smarcb1Q9Z0H3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcb1Q9Z0H3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.92■□□□□ 0.94
Smarcb1Q9Z0H3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcb1Q9Z0H3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcb1Q9Z0H3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcb1Q9Z0H3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcb1Q9Z0H3 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.92■□□□□ 0.94
Smarcb1Q9Z0H3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarcb1Q9Z0H3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Smarcb1Q9Z0H3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.91■□□□□ 0.94
Smarcb1Q9Z0H3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.91■□□□□ 0.94
Smarcb1Q9Z0H3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarcb1Q9Z0H3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarcb1Q9Z0H3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcb1Q9Z0H3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcb1Q9Z0H3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcb1Q9Z0H3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcb1Q9Z0H3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.9■□□□□ 0.94
Smarcb1Q9Z0H3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcb1Q9Z0H3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smarcb1Q9Z0H3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smarcb1Q9Z0H3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smarcb1Q9Z0H3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Smarcb1Q9Z0H3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarcb1Q9Z0H3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarcb1Q9Z0H3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smarcb1Q9Z0H3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.88■□□□□ 0.93
Smarcb1Q9Z0H3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarcb1Q9Z0H3 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smarcb1Q9Z0H3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smarcb1Q9Z0H3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.88■□□□□ 0.93
Smarcb1Q9Z0H3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smarcb1Q9Z0H3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Smarcb1Q9Z0H3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcb1Q9Z0H3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcb1Q9Z0H3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcb1Q9Z0H3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcb1Q9Z0H3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.87■□□□□ 0.93
Smarcb1Q9Z0H3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.87■□□□□ 0.93
Smarcb1Q9Z0H3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcb1Q9Z0H3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Smarcb1Q9Z0H3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcb1Q9Z0H3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcb1Q9Z0H3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcb1Q9Z0H3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcb1Q9Z0H3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcb1Q9Z0H3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcb1Q9Z0H3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcb1Q9Z0H3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcb1Q9Z0H3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Smarcb1Q9Z0H3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcb1Q9Z0H3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Smarcb1Q9Z0H3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcb1Q9Z0H3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Smarcb1Q9Z0H3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcb1Q9Z0H3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms