Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps29Q9QZ88 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps29Q9QZ88 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Vps29Q9QZ88 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.28■□□□□ 0.68
Vps29Q9QZ88 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vps29Q9QZ88 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps29Q9QZ88 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps29Q9QZ88 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Vps29Q9QZ88 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.28■□□□□ 0.68
Vps29Q9QZ88 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.28■□□□□ 0.68
Vps29Q9QZ88 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Vps29Q9QZ88 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps29Q9QZ88 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps29Q9QZ88 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps29Q9QZ88 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps29Q9QZ88 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps29Q9QZ88 Etf1-202ENSMUST00000180351 108 ntBASIC19.27■□□□□ 0.68
Vps29Q9QZ88 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Vps29Q9QZ88 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps29Q9QZ88 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps29Q9QZ88 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps29Q9QZ88 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps29Q9QZ88 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps29Q9QZ88 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Vps29Q9QZ88 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.25■□□□□ 0.67
Vps29Q9QZ88 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps29Q9QZ88 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vps29Q9QZ88 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps29Q9QZ88 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.25■□□□□ 0.67
Vps29Q9QZ88 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps29Q9QZ88 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps29Q9QZ88 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vps29Q9QZ88 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Vps29Q9QZ88 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Vps29Q9QZ88 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps29Q9QZ88 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vps29Q9QZ88 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps29Q9QZ88 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps29Q9QZ88 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps29Q9QZ88 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.24■□□□□ 0.67
Vps29Q9QZ88 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps29Q9QZ88 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps29Q9QZ88 Gm9870-201ENSMUST00000063874 645 ntBASIC19.24■□□□□ 0.67
Vps29Q9QZ88 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps29Q9QZ88 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps29Q9QZ88 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps29Q9QZ88 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps29Q9QZ88 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Vps29Q9QZ88 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vps29Q9QZ88 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps29Q9QZ88 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps29Q9QZ88 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Vps29Q9QZ88 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Vps29Q9QZ88 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.22■□□□□ 0.67
Vps29Q9QZ88 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.22■□□□□ 0.67
Vps29Q9QZ88 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.22■□□□□ 0.67
Vps29Q9QZ88 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps29Q9QZ88 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps29Q9QZ88 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.22■□□□□ 0.67
Vps29Q9QZ88 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps29Q9QZ88 Notumos-201ENSMUST00000151998 2659 ntBASIC19.22■□□□□ 0.67
Vps29Q9QZ88 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps29Q9QZ88 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Vps29Q9QZ88 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Vps29Q9QZ88 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.22■□□□□ 0.67
Vps29Q9QZ88 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Vps29Q9QZ88 Gm9959-201ENSMUST00000068277 390 ntBASIC19.21■□□□□ 0.67
Vps29Q9QZ88 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps29Q9QZ88 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps29Q9QZ88 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Vps29Q9QZ88 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps29Q9QZ88 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Vps29Q9QZ88 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps29Q9QZ88 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps29Q9QZ88 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps29Q9QZ88 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vps29Q9QZ88 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vps29Q9QZ88 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.2■□□□□ 0.66
Vps29Q9QZ88 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vps29Q9QZ88 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps29Q9QZ88 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps29Q9QZ88 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps29Q9QZ88 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps29Q9QZ88 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps29Q9QZ88 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps29Q9QZ88 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps29Q9QZ88 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps29Q9QZ88 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
Vps29Q9QZ88 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.19■□□□□ 0.66
Vps29Q9QZ88 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps29Q9QZ88 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps29Q9QZ88 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Vps29Q9QZ88 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.18■□□□□ 0.66
Vps29Q9QZ88 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.18■□□□□ 0.66
Vps29Q9QZ88 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Vps29Q9QZ88 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps29Q9QZ88 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps29Q9QZ88 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps29Q9QZ88 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Vps29Q9QZ88 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms