Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sec61a2Q9JLR1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.01■□□□□ 0.47
Sec61a2Q9JLR1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.01■□□□□ 0.47
Sec61a2Q9JLR1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sec61a2Q9JLR1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sec61a2Q9JLR1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Sec61a2Q9JLR1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.01■□□□□ 0.47
Sec61a2Q9JLR1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18■□□□□ 0.47
Sec61a2Q9JLR1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sec61a2Q9JLR1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sec61a2Q9JLR1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Sec61a2Q9JLR1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sec61a2Q9JLR1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sec61a2Q9JLR1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18■□□□□ 0.47
Sec61a2Q9JLR1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sec61a2Q9JLR1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Sec61a2Q9JLR1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sec61a2Q9JLR1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Sec61a2Q9JLR1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sec61a2Q9JLR1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sec61a2Q9JLR1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sec61a2Q9JLR1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sec61a2Q9JLR1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.99■□□□□ 0.47
Sec61a2Q9JLR1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sec61a2Q9JLR1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sec61a2Q9JLR1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.99■□□□□ 0.47
Sec61a2Q9JLR1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Sec61a2Q9JLR1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sec61a2Q9JLR1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sec61a2Q9JLR1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.98■□□□□ 0.47
Sec61a2Q9JLR1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sec61a2Q9JLR1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sec61a2Q9JLR1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sec61a2Q9JLR1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sec61a2Q9JLR1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sec61a2Q9JLR1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sec61a2Q9JLR1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sec61a2Q9JLR1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.97■□□□□ 0.47
Sec61a2Q9JLR1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sec61a2Q9JLR1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sec61a2Q9JLR1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sec61a2Q9JLR1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.97■□□□□ 0.47
Sec61a2Q9JLR1 Gm22238-201ENSMUST00000175222 88 ntBASIC17.97■□□□□ 0.47
Sec61a2Q9JLR1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sec61a2Q9JLR1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sec61a2Q9JLR1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Sec61a2Q9JLR1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sec61a2Q9JLR1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sec61a2Q9JLR1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sec61a2Q9JLR1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Sec61a2Q9JLR1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sec61a2Q9JLR1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sec61a2Q9JLR1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sec61a2Q9JLR1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sec61a2Q9JLR1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Sec61a2Q9JLR1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.96■□□□□ 0.47
Sec61a2Q9JLR1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.96■□□□□ 0.47
Sec61a2Q9JLR1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sec61a2Q9JLR1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sec61a2Q9JLR1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sec61a2Q9JLR1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sec61a2Q9JLR1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sec61a2Q9JLR1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Sec61a2Q9JLR1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sec61a2Q9JLR1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sec61a2Q9JLR1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sec61a2Q9JLR1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sec61a2Q9JLR1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Sec61a2Q9JLR1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sec61a2Q9JLR1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sec61a2Q9JLR1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sec61a2Q9JLR1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sec61a2Q9JLR1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sec61a2Q9JLR1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sec61a2Q9JLR1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sec61a2Q9JLR1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.95■□□□□ 0.46
Sec61a2Q9JLR1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sec61a2Q9JLR1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sec61a2Q9JLR1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sec61a2Q9JLR1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sec61a2Q9JLR1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Sec61a2Q9JLR1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Sec61a2Q9JLR1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.94■□□□□ 0.46
Sec61a2Q9JLR1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sec61a2Q9JLR1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sec61a2Q9JLR1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.94■□□□□ 0.46
Sec61a2Q9JLR1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sec61a2Q9JLR1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sec61a2Q9JLR1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sec61a2Q9JLR1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sec61a2Q9JLR1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sec61a2Q9JLR1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sec61a2Q9JLR1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sec61a2Q9JLR1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.94■□□□□ 0.46
Sec61a2Q9JLR1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sec61a2Q9JLR1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sec61a2Q9JLR1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sec61a2Q9JLR1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sec61a2Q9JLR1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sec61a2Q9JLR1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms