Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn5aQ9JJV9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn5aQ9JJV9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.09■□□□□ 0.97
Scn5aQ9JJV9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.09■□□□□ 0.97
Scn5aQ9JJV9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scn5aQ9JJV9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scn5aQ9JJV9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scn5aQ9JJV9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Scn5aQ9JJV9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scn5aQ9JJV9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scn5aQ9JJV9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scn5aQ9JJV9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Scn5aQ9JJV9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn5aQ9JJV9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Scn5aQ9JJV9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.07■□□□□ 0.96
Scn5aQ9JJV9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.07■□□□□ 0.96
Scn5aQ9JJV9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Scn5aQ9JJV9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn5aQ9JJV9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.07■□□□□ 0.96
Scn5aQ9JJV9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.07■□□□□ 0.96
Scn5aQ9JJV9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.07■□□□□ 0.96
Scn5aQ9JJV9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn5aQ9JJV9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.07■□□□□ 0.96
Scn5aQ9JJV9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn5aQ9JJV9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Scn5aQ9JJV9 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.07■□□□□ 0.96
Scn5aQ9JJV9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.07■□□□□ 0.96
Scn5aQ9JJV9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Scn5aQ9JJV9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn5aQ9JJV9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn5aQ9JJV9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn5aQ9JJV9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn5aQ9JJV9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn5aQ9JJV9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Scn5aQ9JJV9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn5aQ9JJV9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn5aQ9JJV9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn5aQ9JJV9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn5aQ9JJV9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn5aQ9JJV9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
Scn5aQ9JJV9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Scn5aQ9JJV9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.05■□□□□ 0.96
Scn5aQ9JJV9 Gm9988-201ENSMUST00000069786 435 ntBASIC21.05■□□□□ 0.96
Scn5aQ9JJV9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn5aQ9JJV9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Scn5aQ9JJV9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Scn5aQ9JJV9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn5aQ9JJV9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn5aQ9JJV9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Scn5aQ9JJV9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.05■□□□□ 0.96
Scn5aQ9JJV9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Scn5aQ9JJV9 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.05■□□□□ 0.96
Scn5aQ9JJV9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn5aQ9JJV9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Scn5aQ9JJV9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn5aQ9JJV9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn5aQ9JJV9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn5aQ9JJV9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn5aQ9JJV9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn5aQ9JJV9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn5aQ9JJV9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn5aQ9JJV9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Scn5aQ9JJV9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.04■□□□□ 0.96
Scn5aQ9JJV9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn5aQ9JJV9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn5aQ9JJV9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn5aQ9JJV9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scn5aQ9JJV9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scn5aQ9JJV9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn5aQ9JJV9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn5aQ9JJV9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn5aQ9JJV9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn5aQ9JJV9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn5aQ9JJV9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.02■□□□□ 0.96
Scn5aQ9JJV9 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.02■□□□□ 0.96
Scn5aQ9JJV9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Scn5aQ9JJV9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.02■□□□□ 0.96
Scn5aQ9JJV9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.02■□□□□ 0.96
Scn5aQ9JJV9 Gm27801-201ENSMUST00000184174 223 ntBASIC21.02■□□□□ 0.96
Scn5aQ9JJV9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn5aQ9JJV9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn5aQ9JJV9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.02■□□□□ 0.96
Scn5aQ9JJV9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn5aQ9JJV9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn5aQ9JJV9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn5aQ9JJV9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Scn5aQ9JJV9 Reep4-203ENSMUST00000226563 1444 ntBASIC21.01■□□□□ 0.95
Scn5aQ9JJV9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn5aQ9JJV9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.01■□□□□ 0.95
Scn5aQ9JJV9 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.01■□□□□ 0.95
Scn5aQ9JJV9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Scn5aQ9JJV9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn5aQ9JJV9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scn5aQ9JJV9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21■□□□□ 0.95
Scn5aQ9JJV9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scn5aQ9JJV9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scn5aQ9JJV9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.99■□□□□ 0.95
Scn5aQ9JJV9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn5aQ9JJV9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scn5aQ9JJV9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms