Protein–RNA interactions for Protein: Q9JHW9

Aldh1a3, Aldehyde dehydrogenase family 1 member A3, mousemouse

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a3Q9JHW9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Aldh1a3Q9JHW9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.62■□□□□ 0.89
Aldh1a3Q9JHW9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Aldh1a3Q9JHW9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Aldh1a3Q9JHW9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.62■□□□□ 0.89
Aldh1a3Q9JHW9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Aldh1a3Q9JHW9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Aldh1a3Q9JHW9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Aldh1a3Q9JHW9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Aldh1a3Q9JHW9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Aldh1a3Q9JHW9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Aldh1a3Q9JHW9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Aldh1a3Q9JHW9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.61■□□□□ 0.89
Aldh1a3Q9JHW9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
Aldh1a3Q9JHW9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
Aldh1a3Q9JHW9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Aldh1a3Q9JHW9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Aldh1a3Q9JHW9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Aldh1a3Q9JHW9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
Aldh1a3Q9JHW9 Notumos-201ENSMUST00000151998 2659 ntBASIC20.6■□□□□ 0.89
Aldh1a3Q9JHW9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Aldh1a3Q9JHW9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.6■□□□□ 0.89
Aldh1a3Q9JHW9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Aldh1a3Q9JHW9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Aldh1a3Q9JHW9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.59■□□□□ 0.89
Aldh1a3Q9JHW9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Aldh1a3Q9JHW9 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.59■□□□□ 0.89
Aldh1a3Q9JHW9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.59■□□□□ 0.89
Aldh1a3Q9JHW9 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.59■□□□□ 0.89
Aldh1a3Q9JHW9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Aldh1a3Q9JHW9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Aldh1a3Q9JHW9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Aldh1a3Q9JHW9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Aldh1a3Q9JHW9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Aldh1a3Q9JHW9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Aldh1a3Q9JHW9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Aldh1a3Q9JHW9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Aldh1a3Q9JHW9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Aldh1a3Q9JHW9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Aldh1a3Q9JHW9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Aldh1a3Q9JHW9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Aldh1a3Q9JHW9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Aldh1a3Q9JHW9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Aldh1a3Q9JHW9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Aldh1a3Q9JHW9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Aldh1a3Q9JHW9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Aldh1a3Q9JHW9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Aldh1a3Q9JHW9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Aldh1a3Q9JHW9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.57■□□□□ 0.88
Aldh1a3Q9JHW9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Aldh1a3Q9JHW9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.57■□□□□ 0.88
Aldh1a3Q9JHW9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Aldh1a3Q9JHW9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Aldh1a3Q9JHW9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Aldh1a3Q9JHW9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Aldh1a3Q9JHW9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Aldh1a3Q9JHW9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Aldh1a3Q9JHW9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Aldh1a3Q9JHW9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Aldh1a3Q9JHW9 Gm43017-201ENSMUST00000198296 752 ntBASIC20.56■□□□□ 0.88
Aldh1a3Q9JHW9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Aldh1a3Q9JHW9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.56■□□□□ 0.88
Aldh1a3Q9JHW9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Aldh1a3Q9JHW9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
Aldh1a3Q9JHW9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Aldh1a3Q9JHW9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Aldh1a3Q9JHW9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Aldh1a3Q9JHW9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Aldh1a3Q9JHW9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Aldh1a3Q9JHW9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Aldh1a3Q9JHW9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Aldh1a3Q9JHW9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Aldh1a3Q9JHW9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Aldh1a3Q9JHW9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Aldh1a3Q9JHW9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Aldh1a3Q9JHW9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Aldh1a3Q9JHW9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Aldh1a3Q9JHW9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.54■□□□□ 0.88
Aldh1a3Q9JHW9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.54■□□□□ 0.88
Aldh1a3Q9JHW9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Aldh1a3Q9JHW9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Aldh1a3Q9JHW9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.53■□□□□ 0.88
Aldh1a3Q9JHW9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Aldh1a3Q9JHW9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Aldh1a3Q9JHW9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Aldh1a3Q9JHW9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Aldh1a3Q9JHW9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Aldh1a3Q9JHW9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Aldh1a3Q9JHW9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Aldh1a3Q9JHW9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Aldh1a3Q9JHW9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Aldh1a3Q9JHW9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Aldh1a3Q9JHW9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Aldh1a3Q9JHW9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Aldh1a3Q9JHW9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Aldh1a3Q9JHW9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Aldh1a3Q9JHW9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Aldh1a3Q9JHW9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Aldh1a3Q9JHW9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Aldh1a3Q9JHW9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms