Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Tnfrsf13bQ9ET35 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf13bQ9ET35 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf13bQ9ET35 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Tnfrsf13bQ9ET35 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf13bQ9ET35 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf13bQ9ET35 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf13bQ9ET35 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf13bQ9ET35 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf13bQ9ET35 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf13bQ9ET35 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf13bQ9ET35 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf13bQ9ET35 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Tnfrsf13bQ9ET35 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf13bQ9ET35 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Tnfrsf13bQ9ET35 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC15.84■□□□□ 0.13
Tnfrsf13bQ9ET35 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf13bQ9ET35 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf13bQ9ET35 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf13bQ9ET35 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf13bQ9ET35 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf13bQ9ET35 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.84■□□□□ 0.13
Tnfrsf13bQ9ET35 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.84■□□□□ 0.13
Tnfrsf13bQ9ET35 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Tnfrsf13bQ9ET35 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.83■□□□□ 0.13
Tnfrsf13bQ9ET35 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf13bQ9ET35 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf13bQ9ET35 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Tnfrsf13bQ9ET35 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.83■□□□□ 0.12
Tnfrsf13bQ9ET35 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf13bQ9ET35 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf13bQ9ET35 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.83■□□□□ 0.12
Tnfrsf13bQ9ET35 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf13bQ9ET35 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.83■□□□□ 0.12
Tnfrsf13bQ9ET35 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Tnfrsf13bQ9ET35 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf13bQ9ET35 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf13bQ9ET35 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf13bQ9ET35 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf13bQ9ET35 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Tnfrsf13bQ9ET35 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf13bQ9ET35 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
Tnfrsf13bQ9ET35 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC15.82■□□□□ 0.12
Tnfrsf13bQ9ET35 Gm12366-201ENSMUST00000121722 873 ntBASIC15.82■□□□□ 0.12
Tnfrsf13bQ9ET35 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC15.82■□□□□ 0.12
Tnfrsf13bQ9ET35 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.82■□□□□ 0.12
Tnfrsf13bQ9ET35 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.82■□□□□ 0.12
Tnfrsf13bQ9ET35 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Tnfrsf13bQ9ET35 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC15.82■□□□□ 0.12
Tnfrsf13bQ9ET35 Gm5786-201ENSMUST00000085368 882 ntBASIC15.82■□□□□ 0.12
Tnfrsf13bQ9ET35 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf13bQ9ET35 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf13bQ9ET35 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.82■□□□□ 0.12
Tnfrsf13bQ9ET35 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf13bQ9ET35 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf13bQ9ET35 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.82■□□□□ 0.12
Tnfrsf13bQ9ET35 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf13bQ9ET35 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.81■□□□□ 0.12
Tnfrsf13bQ9ET35 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf13bQ9ET35 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf13bQ9ET35 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf13bQ9ET35 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf13bQ9ET35 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf13bQ9ET35 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf13bQ9ET35 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf13bQ9ET35 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf13bQ9ET35 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf13bQ9ET35 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf13bQ9ET35 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf13bQ9ET35 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Tnfrsf13bQ9ET35 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Tnfrsf13bQ9ET35 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf13bQ9ET35 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Tnfrsf13bQ9ET35 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf13bQ9ET35 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC15.8■□□□□ 0.12
Tnfrsf13bQ9ET35 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Tnfrsf13bQ9ET35 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf13bQ9ET35 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf13bQ9ET35 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf13bQ9ET35 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf13bQ9ET35 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf13bQ9ET35 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf13bQ9ET35 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf13bQ9ET35 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf13bQ9ET35 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf13bQ9ET35 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.79■□□□□ 0.12
Tnfrsf13bQ9ET35 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf13bQ9ET35 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.79■□□□□ 0.12
Tnfrsf13bQ9ET35 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf13bQ9ET35 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf13bQ9ET35 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf13bQ9ET35 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf13bQ9ET35 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf13bQ9ET35 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf13bQ9ET35 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf13bQ9ET35 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.78■□□□□ 0.12
Tnfrsf13bQ9ET35 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf13bQ9ET35 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf13bQ9ET35 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Tnfrsf13bQ9ET35 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms