Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpne8Q9DC53 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpne8Q9DC53 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpne8Q9DC53 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cpne8Q9DC53 Iqck-206ENSMUST00000208658 2891 ntBASIC21.07■□□□□ 0.96
Cpne8Q9DC53 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpne8Q9DC53 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpne8Q9DC53 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpne8Q9DC53 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpne8Q9DC53 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpne8Q9DC53 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpne8Q9DC53 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cpne8Q9DC53 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cpne8Q9DC53 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cpne8Q9DC53 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cpne8Q9DC53 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cpne8Q9DC53 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cpne8Q9DC53 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Cpne8Q9DC53 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cpne8Q9DC53 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne8Q9DC53 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne8Q9DC53 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Cpne8Q9DC53 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne8Q9DC53 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne8Q9DC53 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne8Q9DC53 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne8Q9DC53 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne8Q9DC53 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.05■□□□□ 0.96
Cpne8Q9DC53 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.05■□□□□ 0.96
Cpne8Q9DC53 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne8Q9DC53 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne8Q9DC53 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne8Q9DC53 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne8Q9DC53 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne8Q9DC53 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne8Q9DC53 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne8Q9DC53 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne8Q9DC53 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne8Q9DC53 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpne8Q9DC53 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpne8Q9DC53 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cpne8Q9DC53 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpne8Q9DC53 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.04■□□□□ 0.96
Cpne8Q9DC53 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpne8Q9DC53 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpne8Q9DC53 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.04■□□□□ 0.96
Cpne8Q9DC53 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Cpne8Q9DC53 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpne8Q9DC53 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpne8Q9DC53 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpne8Q9DC53 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpne8Q9DC53 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpne8Q9DC53 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpne8Q9DC53 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpne8Q9DC53 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.03■□□□□ 0.96
Cpne8Q9DC53 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.03■□□□□ 0.96
Cpne8Q9DC53 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Cpne8Q9DC53 Gm9959-201ENSMUST00000068277 390 ntBASIC21.03■□□□□ 0.96
Cpne8Q9DC53 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpne8Q9DC53 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cpne8Q9DC53 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.02■□□□□ 0.96
Cpne8Q9DC53 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpne8Q9DC53 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Cpne8Q9DC53 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Cpne8Q9DC53 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Cpne8Q9DC53 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cpne8Q9DC53 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Cpne8Q9DC53 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cpne8Q9DC53 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cpne8Q9DC53 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.01■□□□□ 0.95
Cpne8Q9DC53 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cpne8Q9DC53 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.01■□□□□ 0.95
Cpne8Q9DC53 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cpne8Q9DC53 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Cpne8Q9DC53 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cpne8Q9DC53 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Cpne8Q9DC53 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cpne8Q9DC53 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cpne8Q9DC53 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Cpne8Q9DC53 AC093043.1-201ENSMUST00000226700 898 ntBASIC21■□□□□ 0.95
Cpne8Q9DC53 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Cpne8Q9DC53 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Cpne8Q9DC53 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cpne8Q9DC53 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cpne8Q9DC53 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Cpne8Q9DC53 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cpne8Q9DC53 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
Cpne8Q9DC53 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.99■□□□□ 0.95
Cpne8Q9DC53 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cpne8Q9DC53 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cpne8Q9DC53 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpne8Q9DC53 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpne8Q9DC53 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
Cpne8Q9DC53 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
Cpne8Q9DC53 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpne8Q9DC53 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpne8Q9DC53 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpne8Q9DC53 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpne8Q9DC53 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Cpne8Q9DC53 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms