Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retreg3Q9CQV4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.26■□□□□ 0.83
Retreg3Q9CQV4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retreg3Q9CQV4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.26■□□□□ 0.83
Retreg3Q9CQV4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retreg3Q9CQV4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retreg3Q9CQV4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retreg3Q9CQV4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retreg3Q9CQV4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retreg3Q9CQV4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.25■□□□□ 0.83
Retreg3Q9CQV4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Retreg3Q9CQV4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retreg3Q9CQV4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Retreg3Q9CQV4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retreg3Q9CQV4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retreg3Q9CQV4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retreg3Q9CQV4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retreg3Q9CQV4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retreg3Q9CQV4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Retreg3Q9CQV4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retreg3Q9CQV4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retreg3Q9CQV4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retreg3Q9CQV4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retreg3Q9CQV4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retreg3Q9CQV4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retreg3Q9CQV4 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.23■□□□□ 0.83
Retreg3Q9CQV4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.23■□□□□ 0.83
Retreg3Q9CQV4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Retreg3Q9CQV4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Retreg3Q9CQV4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retreg3Q9CQV4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.22■□□□□ 0.83
Retreg3Q9CQV4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retreg3Q9CQV4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retreg3Q9CQV4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.22■□□□□ 0.83
Retreg3Q9CQV4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.22■□□□□ 0.83
Retreg3Q9CQV4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retreg3Q9CQV4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Retreg3Q9CQV4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retreg3Q9CQV4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retreg3Q9CQV4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retreg3Q9CQV4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retreg3Q9CQV4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.21■□□□□ 0.83
Retreg3Q9CQV4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.21■□□□□ 0.83
Retreg3Q9CQV4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retreg3Q9CQV4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retreg3Q9CQV4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retreg3Q9CQV4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retreg3Q9CQV4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retreg3Q9CQV4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retreg3Q9CQV4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retreg3Q9CQV4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retreg3Q9CQV4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.2■□□□□ 0.82
Retreg3Q9CQV4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retreg3Q9CQV4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Retreg3Q9CQV4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retreg3Q9CQV4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retreg3Q9CQV4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retreg3Q9CQV4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retreg3Q9CQV4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.18■□□□□ 0.82
Retreg3Q9CQV4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.18■□□□□ 0.82
Retreg3Q9CQV4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.18■□□□□ 0.82
Retreg3Q9CQV4 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retreg3Q9CQV4 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.18■□□□□ 0.82
Retreg3Q9CQV4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Retreg3Q9CQV4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retreg3Q9CQV4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.17■□□□□ 0.82
Retreg3Q9CQV4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.17■□□□□ 0.82
Retreg3Q9CQV4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retreg3Q9CQV4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retreg3Q9CQV4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.17■□□□□ 0.82
Retreg3Q9CQV4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retreg3Q9CQV4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retreg3Q9CQV4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.17■□□□□ 0.82
Retreg3Q9CQV4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retreg3Q9CQV4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retreg3Q9CQV4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retreg3Q9CQV4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retreg3Q9CQV4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retreg3Q9CQV4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retreg3Q9CQV4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retreg3Q9CQV4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retreg3Q9CQV4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retreg3Q9CQV4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retreg3Q9CQV4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retreg3Q9CQV4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retreg3Q9CQV4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Retreg3Q9CQV4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retreg3Q9CQV4 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.15■□□□□ 0.82
Retreg3Q9CQV4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.15■□□□□ 0.82
Retreg3Q9CQV4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retreg3Q9CQV4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retreg3Q9CQV4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Retreg3Q9CQV4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retreg3Q9CQV4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retreg3Q9CQV4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Retreg3Q9CQV4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.15■□□□□ 0.82
Retreg3Q9CQV4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Retreg3Q9CQV4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retreg3Q9CQV4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retreg3Q9CQV4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms