Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cotl1Q9CQI6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cotl1Q9CQI6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Cotl1Q9CQI6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cotl1Q9CQI6 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cotl1Q9CQI6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cotl1Q9CQI6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.61■□□□□ 0.09
Cotl1Q9CQI6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cotl1Q9CQI6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cotl1Q9CQI6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Cotl1Q9CQI6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cotl1Q9CQI6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cotl1Q9CQI6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cotl1Q9CQI6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cotl1Q9CQI6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cotl1Q9CQI6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Cotl1Q9CQI6 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cotl1Q9CQI6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.6■□□□□ 0.09
Cotl1Q9CQI6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cotl1Q9CQI6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC15.6■□□□□ 0.09
Cotl1Q9CQI6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15.6■□□□□ 0.09
Cotl1Q9CQI6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cotl1Q9CQI6 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cotl1Q9CQI6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Cotl1Q9CQI6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cotl1Q9CQI6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Cotl1Q9CQI6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cotl1Q9CQI6 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cotl1Q9CQI6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
Cotl1Q9CQI6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cotl1Q9CQI6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cotl1Q9CQI6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cotl1Q9CQI6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cotl1Q9CQI6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cotl1Q9CQI6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cotl1Q9CQI6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cotl1Q9CQI6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cotl1Q9CQI6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cotl1Q9CQI6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cotl1Q9CQI6 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cotl1Q9CQI6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cotl1Q9CQI6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cotl1Q9CQI6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC15.59■□□□□ 0.09
Cotl1Q9CQI6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cotl1Q9CQI6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cotl1Q9CQI6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cotl1Q9CQI6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cotl1Q9CQI6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Cotl1Q9CQI6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Cotl1Q9CQI6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cotl1Q9CQI6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cotl1Q9CQI6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Cotl1Q9CQI6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Cotl1Q9CQI6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cotl1Q9CQI6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cotl1Q9CQI6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cotl1Q9CQI6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC15.57■□□□□ 0.08
Cotl1Q9CQI6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cotl1Q9CQI6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cotl1Q9CQI6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cotl1Q9CQI6 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Cotl1Q9CQI6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cotl1Q9CQI6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cotl1Q9CQI6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cotl1Q9CQI6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cotl1Q9CQI6 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cotl1Q9CQI6 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cotl1Q9CQI6 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cotl1Q9CQI6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cotl1Q9CQI6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cotl1Q9CQI6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cotl1Q9CQI6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.56■□□□□ 0.08
Cotl1Q9CQI6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cotl1Q9CQI6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cotl1Q9CQI6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cotl1Q9CQI6 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cotl1Q9CQI6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cotl1Q9CQI6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cotl1Q9CQI6 Haglr-201ENSMUST00000100000 2085 ntBASIC15.56■□□□□ 0.08
Cotl1Q9CQI6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Cotl1Q9CQI6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Cotl1Q9CQI6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cotl1Q9CQI6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cotl1Q9CQI6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cotl1Q9CQI6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cotl1Q9CQI6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cotl1Q9CQI6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cotl1Q9CQI6 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cotl1Q9CQI6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC15.55■□□□□ 0.08
Cotl1Q9CQI6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Cotl1Q9CQI6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cotl1Q9CQI6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Cotl1Q9CQI6 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.55■□□□□ 0.08
Cotl1Q9CQI6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cotl1Q9CQI6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cotl1Q9CQI6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cotl1Q9CQI6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cotl1Q9CQI6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cotl1Q9CQI6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cotl1Q9CQI6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms