Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim16Q99PP9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim16Q99PP9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim16Q99PP9 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.53■□□□□ 0.72
Trim16Q99PP9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Trim16Q99PP9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.52■□□□□ 0.72
Trim16Q99PP9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim16Q99PP9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.52■□□□□ 0.72
Trim16Q99PP9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim16Q99PP9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim16Q99PP9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim16Q99PP9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim16Q99PP9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim16Q99PP9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim16Q99PP9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim16Q99PP9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim16Q99PP9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim16Q99PP9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim16Q99PP9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Trim16Q99PP9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim16Q99PP9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Trim16Q99PP9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim16Q99PP9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim16Q99PP9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.51■□□□□ 0.71
Trim16Q99PP9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim16Q99PP9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim16Q99PP9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim16Q99PP9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim16Q99PP9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim16Q99PP9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim16Q99PP9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim16Q99PP9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim16Q99PP9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim16Q99PP9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim16Q99PP9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim16Q99PP9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim16Q99PP9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Trim16Q99PP9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim16Q99PP9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim16Q99PP9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim16Q99PP9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim16Q99PP9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trim16Q99PP9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim16Q99PP9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim16Q99PP9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trim16Q99PP9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim16Q99PP9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim16Q99PP9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.49■□□□□ 0.71
Trim16Q99PP9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.49■□□□□ 0.71
Trim16Q99PP9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim16Q99PP9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Trim16Q99PP9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim16Q99PP9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.49■□□□□ 0.71
Trim16Q99PP9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim16Q99PP9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trim16Q99PP9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim16Q99PP9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim16Q99PP9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim16Q99PP9 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.48■□□□□ 0.71
Trim16Q99PP9 Gm22238-201ENSMUST00000175222 88 ntBASIC19.48■□□□□ 0.71
Trim16Q99PP9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim16Q99PP9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim16Q99PP9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
Trim16Q99PP9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim16Q99PP9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Trim16Q99PP9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Trim16Q99PP9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim16Q99PP9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.47■□□□□ 0.71
Trim16Q99PP9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim16Q99PP9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.47■□□□□ 0.71
Trim16Q99PP9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.47■□□□□ 0.71
Trim16Q99PP9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.47■□□□□ 0.71
Trim16Q99PP9 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.47■□□□□ 0.71
Trim16Q99PP9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim16Q99PP9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
Trim16Q99PP9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim16Q99PP9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim16Q99PP9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim16Q99PP9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim16Q99PP9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim16Q99PP9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim16Q99PP9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim16Q99PP9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trim16Q99PP9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.46■□□□□ 0.71
Trim16Q99PP9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Trim16Q99PP9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim16Q99PP9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim16Q99PP9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trim16Q99PP9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim16Q99PP9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.46■□□□□ 0.71
Trim16Q99PP9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim16Q99PP9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim16Q99PP9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim16Q99PP9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim16Q99PP9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trim16Q99PP9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Trim16Q99PP9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim16Q99PP9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim16Q99PP9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim16Q99PP9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms