Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Pcdha3Q91Y16 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha3Q91Y16 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Pcdha3Q91Y16 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha3Q91Y16 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha3Q91Y16 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.03■□□□□ 0.96
Pcdha3Q91Y16 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha3Q91Y16 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha3Q91Y16 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Pcdha3Q91Y16 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha3Q91Y16 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha3Q91Y16 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha3Q91Y16 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
Pcdha3Q91Y16 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.02■□□□□ 0.96
Pcdha3Q91Y16 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha3Q91Y16 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha3Q91Y16 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Pcdha3Q91Y16 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdha3Q91Y16 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.02■□□□□ 0.95
Pcdha3Q91Y16 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdha3Q91Y16 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha3Q91Y16 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Pcdha3Q91Y16 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha3Q91Y16 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha3Q91Y16 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.01■□□□□ 0.95
Pcdha3Q91Y16 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha3Q91Y16 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha3Q91Y16 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha3Q91Y16 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha3Q91Y16 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha3Q91Y16 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21■□□□□ 0.95
Pcdha3Q91Y16 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha3Q91Y16 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha3Q91Y16 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha3Q91Y16 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21■□□□□ 0.95
Pcdha3Q91Y16 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha3Q91Y16 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Pcdha3Q91Y16 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha3Q91Y16 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha3Q91Y16 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha3Q91Y16 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha3Q91Y16 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha3Q91Y16 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.99■□□□□ 0.95
Pcdha3Q91Y16 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha3Q91Y16 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Pcdha3Q91Y16 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha3Q91Y16 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha3Q91Y16 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Pcdha3Q91Y16 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.98■□□□□ 0.95
Pcdha3Q91Y16 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha3Q91Y16 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha3Q91Y16 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha3Q91Y16 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.98■□□□□ 0.95
Pcdha3Q91Y16 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.98■□□□□ 0.95
Pcdha3Q91Y16 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.98■□□□□ 0.95
Pcdha3Q91Y16 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha3Q91Y16 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha3Q91Y16 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha3Q91Y16 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha3Q91Y16 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.98■□□□□ 0.95
Pcdha3Q91Y16 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha3Q91Y16 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha3Q91Y16 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha3Q91Y16 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.97■□□□□ 0.95
Pcdha3Q91Y16 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha3Q91Y16 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha3Q91Y16 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Pcdha3Q91Y16 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha3Q91Y16 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha3Q91Y16 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha3Q91Y16 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.97■□□□□ 0.95
Pcdha3Q91Y16 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha3Q91Y16 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
Pcdha3Q91Y16 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha3Q91Y16 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha3Q91Y16 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.96■□□□□ 0.95
Pcdha3Q91Y16 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha3Q91Y16 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.96■□□□□ 0.95
Pcdha3Q91Y16 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha3Q91Y16 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.96■□□□□ 0.95
Pcdha3Q91Y16 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.96■□□□□ 0.95
Pcdha3Q91Y16 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.96■□□□□ 0.95
Pcdha3Q91Y16 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha3Q91Y16 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha3Q91Y16 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha3Q91Y16 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha3Q91Y16 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdha3Q91Y16 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdha3Q91Y16 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdha3Q91Y16 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdha3Q91Y16 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Pcdha3Q91Y16 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdha3Q91Y16 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdha3Q91Y16 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdha3Q91Y16 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdha3Q91Y16 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdha3Q91Y16 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdha3Q91Y16 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Pcdha3Q91Y16 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdha3Q91Y16 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms