Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.96■□□□□ 0.79
Pcdhb3Q91XZ7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Pcdhb3Q91XZ7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb3Q91XZ7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.96■□□□□ 0.79
Pcdhb3Q91XZ7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb3Q91XZ7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Pcdhb3Q91XZ7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Pcdhb3Q91XZ7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb3Q91XZ7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb3Q91XZ7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb3Q91XZ7 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb3Q91XZ7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
Pcdhb3Q91XZ7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.95■□□□□ 0.78
Pcdhb3Q91XZ7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb3Q91XZ7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb3Q91XZ7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb3Q91XZ7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb3Q91XZ7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb3Q91XZ7 Rarb-207ENSMUST00000225921 2756 ntBASIC19.95■□□□□ 0.78
Pcdhb3Q91XZ7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb3Q91XZ7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.94■□□□□ 0.78
Pcdhb3Q91XZ7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb3Q91XZ7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb3Q91XZ7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb3Q91XZ7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Pcdhb3Q91XZ7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb3Q91XZ7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Pcdhb3Q91XZ7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb3Q91XZ7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb3Q91XZ7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.93■□□□□ 0.78
Pcdhb3Q91XZ7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb3Q91XZ7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.93■□□□□ 0.78
Pcdhb3Q91XZ7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.93■□□□□ 0.78
Pcdhb3Q91XZ7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.93■□□□□ 0.78
Pcdhb3Q91XZ7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb3Q91XZ7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb3Q91XZ7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb3Q91XZ7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb3Q91XZ7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb3Q91XZ7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb3Q91XZ7 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb3Q91XZ7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb3Q91XZ7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb3Q91XZ7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Pcdhb3Q91XZ7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb3Q91XZ7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb3Q91XZ7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb3Q91XZ7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb3Q91XZ7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Pcdhb3Q91XZ7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb3Q91XZ7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb3Q91XZ7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Pcdhb3Q91XZ7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Pcdhb3Q91XZ7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb3Q91XZ7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Pcdhb3Q91XZ7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb3Q91XZ7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.91■□□□□ 0.78
Pcdhb3Q91XZ7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.91■□□□□ 0.78
Pcdhb3Q91XZ7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Pcdhb3Q91XZ7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb3Q91XZ7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Pcdhb3Q91XZ7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb3Q91XZ7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb3Q91XZ7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Pcdhb3Q91XZ7 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb3Q91XZ7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb3Q91XZ7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb3Q91XZ7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.9■□□□□ 0.78
Pcdhb3Q91XZ7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.9■□□□□ 0.78
Pcdhb3Q91XZ7 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.9■□□□□ 0.78
Pcdhb3Q91XZ7 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.9■□□□□ 0.78
Pcdhb3Q91XZ7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb3Q91XZ7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb3Q91XZ7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb3Q91XZ7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb3Q91XZ7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb3Q91XZ7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb3Q91XZ7 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.89■□□□□ 0.77
Pcdhb3Q91XZ7 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.89■□□□□ 0.77
Pcdhb3Q91XZ7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb3Q91XZ7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb3Q91XZ7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb3Q91XZ7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb3Q91XZ7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb3Q91XZ7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Pcdhb3Q91XZ7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Pcdhb3Q91XZ7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb3Q91XZ7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb3Q91XZ7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.88■□□□□ 0.77
Pcdhb3Q91XZ7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb3Q91XZ7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.88■□□□□ 0.77
Pcdhb3Q91XZ7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb3Q91XZ7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb3Q91XZ7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Pcdhb3Q91XZ7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb3Q91XZ7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb3Q91XZ7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb3Q91XZ7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb3Q91XZ7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb3Q91XZ7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms