Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Pcdhb4Q91XZ6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb4Q91XZ6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Pcdhb4Q91XZ6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb4Q91XZ6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb4Q91XZ6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Pcdhb4Q91XZ6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.91■□□□□ 0.78
Pcdhb4Q91XZ6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.91■□□□□ 0.78
Pcdhb4Q91XZ6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb4Q91XZ6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb4Q91XZ6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb4Q91XZ6 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb4Q91XZ6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb4Q91XZ6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Pcdhb4Q91XZ6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb4Q91XZ6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.9■□□□□ 0.78
Pcdhb4Q91XZ6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb4Q91XZ6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb4Q91XZ6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb4Q91XZ6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Pcdhb4Q91XZ6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.89■□□□□ 0.77
Pcdhb4Q91XZ6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb4Q91XZ6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.89■□□□□ 0.77
Pcdhb4Q91XZ6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Pcdhb4Q91XZ6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb4Q91XZ6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb4Q91XZ6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb4Q91XZ6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb4Q91XZ6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb4Q91XZ6 Gm40881-201ENSMUST00000223397 166 ntBASIC19.88■□□□□ 0.77
Pcdhb4Q91XZ6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb4Q91XZ6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb4Q91XZ6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb4Q91XZ6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb4Q91XZ6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb4Q91XZ6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb4Q91XZ6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb4Q91XZ6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb4Q91XZ6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb4Q91XZ6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.87■□□□□ 0.77
Pcdhb4Q91XZ6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Pcdhb4Q91XZ6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb4Q91XZ6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb4Q91XZ6 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.87■□□□□ 0.77
Pcdhb4Q91XZ6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb4Q91XZ6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb4Q91XZ6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb4Q91XZ6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.86■□□□□ 0.77
Pcdhb4Q91XZ6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb4Q91XZ6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb4Q91XZ6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb4Q91XZ6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb4Q91XZ6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb4Q91XZ6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb4Q91XZ6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb4Q91XZ6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb4Q91XZ6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb4Q91XZ6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb4Q91XZ6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb4Q91XZ6 Gm15820-201ENSMUST00000201566 728 ntBASIC19.85■□□□□ 0.77
Pcdhb4Q91XZ6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.85■□□□□ 0.77
Pcdhb4Q91XZ6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb4Q91XZ6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb4Q91XZ6 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.85■□□□□ 0.77
Pcdhb4Q91XZ6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb4Q91XZ6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb4Q91XZ6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.84■□□□□ 0.77
Pcdhb4Q91XZ6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb4Q91XZ6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb4Q91XZ6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.84■□□□□ 0.77
Pcdhb4Q91XZ6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Pcdhb4Q91XZ6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.84■□□□□ 0.77
Pcdhb4Q91XZ6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb4Q91XZ6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.77
Pcdhb4Q91XZ6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb4Q91XZ6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb4Q91XZ6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb4Q91XZ6 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.83■□□□□ 0.77
Pcdhb4Q91XZ6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb4Q91XZ6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Pcdhb4Q91XZ6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb4Q91XZ6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb4Q91XZ6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.82■□□□□ 0.76
Pcdhb4Q91XZ6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Pcdhb4Q91XZ6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb4Q91XZ6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb4Q91XZ6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb4Q91XZ6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.82■□□□□ 0.76
Pcdhb4Q91XZ6 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.82■□□□□ 0.76
Pcdhb4Q91XZ6 Gm5812-201ENSMUST00000061073 957 ntBASIC19.82■□□□□ 0.76
Pcdhb4Q91XZ6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Pcdhb4Q91XZ6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.82■□□□□ 0.76
Pcdhb4Q91XZ6 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb4Q91XZ6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.82■□□□□ 0.76
Pcdhb4Q91XZ6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb4Q91XZ6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb4Q91XZ6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb4Q91XZ6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb4Q91XZ6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.81■□□□□ 0.76
Pcdhb4Q91XZ6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms