Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vsx1Q91V10 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Vsx1Q91V10 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vsx1Q91V10 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Vsx1Q91V10 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Vsx1Q91V10 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vsx1Q91V10 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
Vsx1Q91V10 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vsx1Q91V10 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vsx1Q91V10 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Vsx1Q91V10 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Vsx1Q91V10 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Vsx1Q91V10 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.94■□□□□ 0.78
Vsx1Q91V10 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.94■□□□□ 0.78
Vsx1Q91V10 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vsx1Q91V10 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vsx1Q91V10 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vsx1Q91V10 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vsx1Q91V10 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Vsx1Q91V10 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vsx1Q91V10 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Vsx1Q91V10 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vsx1Q91V10 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.93■□□□□ 0.78
Vsx1Q91V10 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.93■□□□□ 0.78
Vsx1Q91V10 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vsx1Q91V10 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vsx1Q91V10 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Vsx1Q91V10 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
Vsx1Q91V10 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.92■□□□□ 0.78
Vsx1Q91V10 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vsx1Q91V10 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.92■□□□□ 0.78
Vsx1Q91V10 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.92■□□□□ 0.78
Vsx1Q91V10 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vsx1Q91V10 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Vsx1Q91V10 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.91■□□□□ 0.78
Vsx1Q91V10 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vsx1Q91V10 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vsx1Q91V10 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vsx1Q91V10 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.91■□□□□ 0.78
Vsx1Q91V10 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vsx1Q91V10 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vsx1Q91V10 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vsx1Q91V10 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Vsx1Q91V10 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Vsx1Q91V10 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vsx1Q91V10 Gm42778-201ENSMUST00000199644 553 ntBASIC19.9■□□□□ 0.78
Vsx1Q91V10 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Vsx1Q91V10 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vsx1Q91V10 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vsx1Q91V10 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Vsx1Q91V10 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.9■□□□□ 0.78
Vsx1Q91V10 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vsx1Q91V10 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vsx1Q91V10 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Vsx1Q91V10 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vsx1Q91V10 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Vsx1Q91V10 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vsx1Q91V10 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vsx1Q91V10 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vsx1Q91V10 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vsx1Q91V10 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vsx1Q91V10 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.88■□□□□ 0.77
Vsx1Q91V10 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vsx1Q91V10 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.88■□□□□ 0.77
Vsx1Q91V10 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.88■□□□□ 0.77
Vsx1Q91V10 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vsx1Q91V10 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vsx1Q91V10 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vsx1Q91V10 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vsx1Q91V10 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.87■□□□□ 0.77
Vsx1Q91V10 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
Vsx1Q91V10 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.87■□□□□ 0.77
Vsx1Q91V10 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vsx1Q91V10 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vsx1Q91V10 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Vsx1Q91V10 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vsx1Q91V10 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vsx1Q91V10 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Vsx1Q91V10 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Vsx1Q91V10 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.86■□□□□ 0.77
Vsx1Q91V10 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vsx1Q91V10 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vsx1Q91V10 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
Vsx1Q91V10 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vsx1Q91V10 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Vsx1Q91V10 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.86■□□□□ 0.77
Vsx1Q91V10 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vsx1Q91V10 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vsx1Q91V10 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
Vsx1Q91V10 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vsx1Q91V10 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Vsx1Q91V10 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vsx1Q91V10 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Vsx1Q91V10 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.85■□□□□ 0.77
Vsx1Q91V10 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.85■□□□□ 0.77
Vsx1Q91V10 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vsx1Q91V10 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vsx1Q91V10 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.85■□□□□ 0.77
Vsx1Q91V10 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Vsx1Q91V10 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms