Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab40bQ8VHP8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab40bQ8VHP8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab40bQ8VHP8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rab40bQ8VHP8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rab40bQ8VHP8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rab40bQ8VHP8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Rab40bQ8VHP8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rab40bQ8VHP8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rab40bQ8VHP8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rab40bQ8VHP8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rab40bQ8VHP8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rab40bQ8VHP8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rab40bQ8VHP8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Rab40bQ8VHP8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rab40bQ8VHP8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.08■□□□□ 0.48
Rab40bQ8VHP8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rab40bQ8VHP8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rab40bQ8VHP8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rab40bQ8VHP8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rab40bQ8VHP8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab40bQ8VHP8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab40bQ8VHP8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab40bQ8VHP8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.07■□□□□ 0.48
Rab40bQ8VHP8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.07■□□□□ 0.48
Rab40bQ8VHP8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab40bQ8VHP8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rab40bQ8VHP8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab40bQ8VHP8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab40bQ8VHP8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab40bQ8VHP8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab40bQ8VHP8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab40bQ8VHP8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rab40bQ8VHP8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.06■□□□□ 0.48
Rab40bQ8VHP8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab40bQ8VHP8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab40bQ8VHP8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Rab40bQ8VHP8 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.05■□□□□ 0.48
Rab40bQ8VHP8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab40bQ8VHP8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab40bQ8VHP8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rab40bQ8VHP8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab40bQ8VHP8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab40bQ8VHP8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Rab40bQ8VHP8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.05■□□□□ 0.48
Rab40bQ8VHP8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rab40bQ8VHP8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab40bQ8VHP8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab40bQ8VHP8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab40bQ8VHP8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab40bQ8VHP8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab40bQ8VHP8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab40bQ8VHP8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Rab40bQ8VHP8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rab40bQ8VHP8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.04■□□□□ 0.48
Rab40bQ8VHP8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.04■□□□□ 0.48
Rab40bQ8VHP8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Rab40bQ8VHP8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.04■□□□□ 0.48
Rab40bQ8VHP8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rab40bQ8VHP8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rab40bQ8VHP8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.04■□□□□ 0.48
Rab40bQ8VHP8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab40bQ8VHP8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab40bQ8VHP8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab40bQ8VHP8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab40bQ8VHP8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab40bQ8VHP8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.03■□□□□ 0.48
Rab40bQ8VHP8 Gm10420-201ENSMUST00000121713 882 ntBASIC18.03■□□□□ 0.48
Rab40bQ8VHP8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab40bQ8VHP8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rab40bQ8VHP8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rab40bQ8VHP8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab40bQ8VHP8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab40bQ8VHP8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab40bQ8VHP8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab40bQ8VHP8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.03■□□□□ 0.48
Rab40bQ8VHP8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.03■□□□□ 0.48
Rab40bQ8VHP8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rab40bQ8VHP8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Rab40bQ8VHP8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rab40bQ8VHP8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rab40bQ8VHP8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Rab40bQ8VHP8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rab40bQ8VHP8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rab40bQ8VHP8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rab40bQ8VHP8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab40bQ8VHP8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rab40bQ8VHP8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.01■□□□□ 0.47
Rab40bQ8VHP8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.01■□□□□ 0.47
Rab40bQ8VHP8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Rab40bQ8VHP8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rab40bQ8VHP8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rab40bQ8VHP8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab40bQ8VHP8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rab40bQ8VHP8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rab40bQ8VHP8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18■□□□□ 0.47
Rab40bQ8VHP8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Rab40bQ8VHP8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rab40bQ8VHP8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rab40bQ8VHP8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms