Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ndc1Q8VCB1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ndc1Q8VCB1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.94■□□□□ 0.62
Ndc1Q8VCB1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ndc1Q8VCB1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ndc1Q8VCB1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ndc1Q8VCB1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.94■□□□□ 0.62
Ndc1Q8VCB1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ndc1Q8VCB1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.94■□□□□ 0.62
Ndc1Q8VCB1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ndc1Q8VCB1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ndc1Q8VCB1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.93■□□□□ 0.62
Ndc1Q8VCB1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ndc1Q8VCB1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ndc1Q8VCB1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ndc1Q8VCB1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Ndc1Q8VCB1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.93■□□□□ 0.62
Ndc1Q8VCB1 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.93■□□□□ 0.62
Ndc1Q8VCB1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ndc1Q8VCB1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.93■□□□□ 0.62
Ndc1Q8VCB1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ndc1Q8VCB1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ndc1Q8VCB1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ndc1Q8VCB1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.93■□□□□ 0.62
Ndc1Q8VCB1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ndc1Q8VCB1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ndc1Q8VCB1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.92■□□□□ 0.62
Ndc1Q8VCB1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ndc1Q8VCB1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ndc1Q8VCB1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ndc1Q8VCB1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ndc1Q8VCB1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ndc1Q8VCB1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.92■□□□□ 0.62
Ndc1Q8VCB1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.92■□□□□ 0.62
Ndc1Q8VCB1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ndc1Q8VCB1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ndc1Q8VCB1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ndc1Q8VCB1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ndc1Q8VCB1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ndc1Q8VCB1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ndc1Q8VCB1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ndc1Q8VCB1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ndc1Q8VCB1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ndc1Q8VCB1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Ndc1Q8VCB1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ndc1Q8VCB1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Ndc1Q8VCB1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ndc1Q8VCB1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.9■□□□□ 0.62
Ndc1Q8VCB1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ndc1Q8VCB1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ndc1Q8VCB1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Ndc1Q8VCB1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Ndc1Q8VCB1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ndc1Q8VCB1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ndc1Q8VCB1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ndc1Q8VCB1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ndc1Q8VCB1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ndc1Q8VCB1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Ndc1Q8VCB1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ndc1Q8VCB1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.89■□□□□ 0.61
Ndc1Q8VCB1 Gm43017-201ENSMUST00000198296 752 ntBASIC18.89■□□□□ 0.61
Ndc1Q8VCB1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ndc1Q8VCB1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ndc1Q8VCB1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.89■□□□□ 0.61
Ndc1Q8VCB1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
Ndc1Q8VCB1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ndc1Q8VCB1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ndc1Q8VCB1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ndc1Q8VCB1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ndc1Q8VCB1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ndc1Q8VCB1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.88■□□□□ 0.61
Ndc1Q8VCB1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Ndc1Q8VCB1 Gm8493-201ENSMUST00000196881 489 ntBASIC18.88■□□□□ 0.61
Ndc1Q8VCB1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ndc1Q8VCB1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ndc1Q8VCB1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ndc1Q8VCB1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ndc1Q8VCB1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ndc1Q8VCB1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ndc1Q8VCB1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ndc1Q8VCB1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ndc1Q8VCB1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ndc1Q8VCB1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Ndc1Q8VCB1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ndc1Q8VCB1 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.86■□□□□ 0.61
Ndc1Q8VCB1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ndc1Q8VCB1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ndc1Q8VCB1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ndc1Q8VCB1 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.86■□□□□ 0.61
Ndc1Q8VCB1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.86■□□□□ 0.61
Ndc1Q8VCB1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ndc1Q8VCB1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ndc1Q8VCB1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ndc1Q8VCB1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ndc1Q8VCB1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ndc1Q8VCB1 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.85■□□□□ 0.61
Ndc1Q8VCB1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ndc1Q8VCB1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ndc1Q8VCB1 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.85■□□□□ 0.61
Ndc1Q8VCB1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms