Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
Rpp40Q8R1F9 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.64■■□□□ 1.05
Rpp40Q8R1F9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rpp40Q8R1F9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rpp40Q8R1F9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rpp40Q8R1F9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rpp40Q8R1F9 Mir6236-201ENSMUST00000184437 123 ntBASIC21.63■■□□□ 1.05
Rpp40Q8R1F9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rpp40Q8R1F9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rpp40Q8R1F9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rpp40Q8R1F9 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.63■■□□□ 1.05
Rpp40Q8R1F9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Rpp40Q8R1F9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rpp40Q8R1F9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Rpp40Q8R1F9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Rpp40Q8R1F9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rpp40Q8R1F9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rpp40Q8R1F9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rpp40Q8R1F9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rpp40Q8R1F9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.62■■□□□ 1.05
Rpp40Q8R1F9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rpp40Q8R1F9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Rpp40Q8R1F9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rpp40Q8R1F9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rpp40Q8R1F9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.62■■□□□ 1.05
Rpp40Q8R1F9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Rpp40Q8R1F9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpp40Q8R1F9 Gm12251-201ENSMUST00000117893 792 ntBASIC21.61■■□□□ 1.05
Rpp40Q8R1F9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Rpp40Q8R1F9 Mir7075-201ENSMUST00000184187 82 ntBASIC21.61■■□□□ 1.05
Rpp40Q8R1F9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rpp40Q8R1F9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpp40Q8R1F9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Rpp40Q8R1F9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rpp40Q8R1F9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
Rpp40Q8R1F9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpp40Q8R1F9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Rpp40Q8R1F9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpp40Q8R1F9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rpp40Q8R1F9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rpp40Q8R1F9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.6■■□□□ 1.05
Rpp40Q8R1F9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Rpp40Q8R1F9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rpp40Q8R1F9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rpp40Q8R1F9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rpp40Q8R1F9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rpp40Q8R1F9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rpp40Q8R1F9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Rpp40Q8R1F9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.59■■□□□ 1.05
Rpp40Q8R1F9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rpp40Q8R1F9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Rpp40Q8R1F9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rpp40Q8R1F9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.58■■□□□ 1.05
Rpp40Q8R1F9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rpp40Q8R1F9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rpp40Q8R1F9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Rpp40Q8R1F9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Rpp40Q8R1F9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.58■■□□□ 1.05
Rpp40Q8R1F9 Gm6139-201ENSMUST00000079261 882 ntBASIC21.58■■□□□ 1.05
Rpp40Q8R1F9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rpp40Q8R1F9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rpp40Q8R1F9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rpp40Q8R1F9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rpp40Q8R1F9 Gm15039-201ENSMUST00000118914 875 ntBASIC21.57■■□□□ 1.04
Rpp40Q8R1F9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rpp40Q8R1F9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Rpp40Q8R1F9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rpp40Q8R1F9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rpp40Q8R1F9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpp40Q8R1F9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpp40Q8R1F9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rpp40Q8R1F9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpp40Q8R1F9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpp40Q8R1F9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rpp40Q8R1F9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpp40Q8R1F9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Rpp40Q8R1F9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpp40Q8R1F9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpp40Q8R1F9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rpp40Q8R1F9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rpp40Q8R1F9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rpp40Q8R1F9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rpp40Q8R1F9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rpp40Q8R1F9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Rpp40Q8R1F9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rpp40Q8R1F9 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.55■■□□□ 1.04
Rpp40Q8R1F9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.55■■□□□ 1.04
Rpp40Q8R1F9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rpp40Q8R1F9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
Rpp40Q8R1F9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
Rpp40Q8R1F9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rpp40Q8R1F9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rpp40Q8R1F9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rpp40Q8R1F9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rpp40Q8R1F9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rpp40Q8R1F9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rpp40Q8R1F9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rpp40Q8R1F9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rpp40Q8R1F9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rpp40Q8R1F9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms