Protein–RNA interactions for Protein: Q8K375

Lrrc56, Leucine-rich repeat-containing protein 56, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc56Q8K375 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Lrrc56Q8K375 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Lrrc56Q8K375 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Lrrc56Q8K375 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Lrrc56Q8K375 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Lrrc56Q8K375 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Lrrc56Q8K375 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.37■■□□□ 1.17
Lrrc56Q8K375 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Lrrc56Q8K375 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Lrrc56Q8K375 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Lrrc56Q8K375 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Lrrc56Q8K375 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC22.37■■□□□ 1.17
Lrrc56Q8K375 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC22.37■■□□□ 1.17
Lrrc56Q8K375 AC112142.1-201ENSMUST00000228796 918 ntBASIC22.37■■□□□ 1.17
Lrrc56Q8K375 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.37■■□□□ 1.17
Lrrc56Q8K375 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Lrrc56Q8K375 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Lrrc56Q8K375 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Lrrc56Q8K375 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Lrrc56Q8K375 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Lrrc56Q8K375 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Lrrc56Q8K375 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC22.36■■□□□ 1.17
Lrrc56Q8K375 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Lrrc56Q8K375 Gm27011-201ENSMUST00000182352 972 ntBASIC22.36■■□□□ 1.17
Lrrc56Q8K375 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Lrrc56Q8K375 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Lrrc56Q8K375 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC22.35■■□□□ 1.17
Lrrc56Q8K375 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC22.35■■□□□ 1.17
Lrrc56Q8K375 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Lrrc56Q8K375 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Lrrc56Q8K375 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Lrrc56Q8K375 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Lrrc56Q8K375 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lrrc56Q8K375 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lrrc56Q8K375 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lrrc56Q8K375 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lrrc56Q8K375 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lrrc56Q8K375 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Lrrc56Q8K375 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lrrc56Q8K375 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lrrc56Q8K375 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC22.33■■□□□ 1.17
Lrrc56Q8K375 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Lrrc56Q8K375 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC22.33■■□□□ 1.17
Lrrc56Q8K375 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Lrrc56Q8K375 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Lrrc56Q8K375 Gm14281-201ENSMUST00000121700 1294 ntBASIC22.32■■□□□ 1.16
Lrrc56Q8K375 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Lrrc56Q8K375 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC22.32■■□□□ 1.16
Lrrc56Q8K375 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC22.32■■□□□ 1.16
Lrrc56Q8K375 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Lrrc56Q8K375 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lrrc56Q8K375 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lrrc56Q8K375 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC22.32■■□□□ 1.16
Lrrc56Q8K375 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lrrc56Q8K375 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lrrc56Q8K375 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lrrc56Q8K375 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lrrc56Q8K375 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC22.31■■□□□ 1.16
Lrrc56Q8K375 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lrrc56Q8K375 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lrrc56Q8K375 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC22.3■■□□□ 1.16
Lrrc56Q8K375 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC22.3■■□□□ 1.16
Lrrc56Q8K375 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Lrrc56Q8K375 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lrrc56Q8K375 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lrrc56Q8K375 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lrrc56Q8K375 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Lrrc56Q8K375 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lrrc56Q8K375 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Lrrc56Q8K375 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC22.29■■□□□ 1.16
Lrrc56Q8K375 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Lrrc56Q8K375 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC22.29■■□□□ 1.16
Lrrc56Q8K375 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lrrc56Q8K375 Gm9988-201ENSMUST00000069786 435 ntBASIC22.29■■□□□ 1.16
Lrrc56Q8K375 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC22.29■■□□□ 1.16
Lrrc56Q8K375 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Lrrc56Q8K375 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lrrc56Q8K375 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Lrrc56Q8K375 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC22.28■■□□□ 1.16
Lrrc56Q8K375 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC22.28■■□□□ 1.16
Lrrc56Q8K375 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC22.28■■□□□ 1.16
Lrrc56Q8K375 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Lrrc56Q8K375 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Lrrc56Q8K375 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC22.28■■□□□ 1.16
Lrrc56Q8K375 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Lrrc56Q8K375 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Lrrc56Q8K375 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lrrc56Q8K375 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lrrc56Q8K375 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lrrc56Q8K375 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lrrc56Q8K375 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lrrc56Q8K375 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Lrrc56Q8K375 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.26■■□□□ 1.15
Lrrc56Q8K375 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lrrc56Q8K375 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lrrc56Q8K375 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Lrrc56Q8K375 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC22.26■■□□□ 1.15
Lrrc56Q8K375 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
Lrrc56Q8K375 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Lrrc56Q8K375 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms