Protein–RNA interactions for Protein: Q8CIG3

Kdm1b, Lysine-specific histone demethylase 1B, mousemouse

Predictions only

Length 826 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1bQ8CIG3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Kdm1bQ8CIG3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.97■□□□□ 0.95
Kdm1bQ8CIG3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.97■□□□□ 0.95
Kdm1bQ8CIG3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.97■□□□□ 0.95
Kdm1bQ8CIG3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Kdm1bQ8CIG3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Kdm1bQ8CIG3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Kdm1bQ8CIG3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Kdm1bQ8CIG3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Kdm1bQ8CIG3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Kdm1bQ8CIG3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Kdm1bQ8CIG3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.96■□□□□ 0.95
Kdm1bQ8CIG3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Kdm1bQ8CIG3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Kdm1bQ8CIG3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.95■□□□□ 0.95
Kdm1bQ8CIG3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
Kdm1bQ8CIG3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Kdm1bQ8CIG3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Kdm1bQ8CIG3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.95■□□□□ 0.94
Kdm1bQ8CIG3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Kdm1bQ8CIG3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Kdm1bQ8CIG3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Kdm1bQ8CIG3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Kdm1bQ8CIG3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Kdm1bQ8CIG3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Kdm1bQ8CIG3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Kdm1bQ8CIG3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Kdm1bQ8CIG3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Kdm1bQ8CIG3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.94■□□□□ 0.94
Kdm1bQ8CIG3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.94■□□□□ 0.94
Kdm1bQ8CIG3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Kdm1bQ8CIG3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Kdm1bQ8CIG3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Kdm1bQ8CIG3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Kdm1bQ8CIG3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Kdm1bQ8CIG3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.93■□□□□ 0.94
Kdm1bQ8CIG3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Kdm1bQ8CIG3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Kdm1bQ8CIG3 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.93■□□□□ 0.94
Kdm1bQ8CIG3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Kdm1bQ8CIG3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Kdm1bQ8CIG3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Kdm1bQ8CIG3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Kdm1bQ8CIG3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Kdm1bQ8CIG3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Kdm1bQ8CIG3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Kdm1bQ8CIG3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.92■□□□□ 0.94
Kdm1bQ8CIG3 Gm22238-201ENSMUST00000175222 88 ntBASIC20.92■□□□□ 0.94
Kdm1bQ8CIG3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Kdm1bQ8CIG3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Kdm1bQ8CIG3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Kdm1bQ8CIG3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.92■□□□□ 0.94
Kdm1bQ8CIG3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Kdm1bQ8CIG3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Kdm1bQ8CIG3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Kdm1bQ8CIG3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Kdm1bQ8CIG3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.91■□□□□ 0.94
Kdm1bQ8CIG3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Kdm1bQ8CIG3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.91■□□□□ 0.94
Kdm1bQ8CIG3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.91■□□□□ 0.94
Kdm1bQ8CIG3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Kdm1bQ8CIG3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Kdm1bQ8CIG3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Kdm1bQ8CIG3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Kdm1bQ8CIG3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Kdm1bQ8CIG3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Kdm1bQ8CIG3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Kdm1bQ8CIG3 Gm43530-201ENSMUST00000195920 274 ntBASIC20.9■□□□□ 0.94
Kdm1bQ8CIG3 Gm45102-201ENSMUST00000207427 857 ntBASIC20.9■□□□□ 0.94
Kdm1bQ8CIG3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Kdm1bQ8CIG3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Kdm1bQ8CIG3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Kdm1bQ8CIG3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Kdm1bQ8CIG3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Kdm1bQ8CIG3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Kdm1bQ8CIG3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Kdm1bQ8CIG3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.94
Kdm1bQ8CIG3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Kdm1bQ8CIG3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.89■□□□□ 0.93
Kdm1bQ8CIG3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Kdm1bQ8CIG3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Kdm1bQ8CIG3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Kdm1bQ8CIG3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.89■□□□□ 0.93
Kdm1bQ8CIG3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Kdm1bQ8CIG3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Kdm1bQ8CIG3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Kdm1bQ8CIG3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Kdm1bQ8CIG3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Kdm1bQ8CIG3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Kdm1bQ8CIG3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Kdm1bQ8CIG3 Gm14117-201ENSMUST00000122417 843 ntBASIC20.88■□□□□ 0.93
Kdm1bQ8CIG3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Kdm1bQ8CIG3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Kdm1bQ8CIG3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Kdm1bQ8CIG3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Kdm1bQ8CIG3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Kdm1bQ8CIG3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.87■□□□□ 0.93
Kdm1bQ8CIG3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Kdm1bQ8CIG3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Kdm1bQ8CIG3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms