Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sox30Q8CGW4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC22.18■■□□□ 1.14
Sox30Q8CGW4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sox30Q8CGW4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Sox30Q8CGW4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sox30Q8CGW4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sox30Q8CGW4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Sox30Q8CGW4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sox30Q8CGW4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sox30Q8CGW4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC22.18■■□□□ 1.14
Sox30Q8CGW4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Sox30Q8CGW4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sox30Q8CGW4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sox30Q8CGW4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.17■■□□□ 1.14
Sox30Q8CGW4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sox30Q8CGW4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sox30Q8CGW4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sox30Q8CGW4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sox30Q8CGW4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sox30Q8CGW4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sox30Q8CGW4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Sox30Q8CGW4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sox30Q8CGW4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.16■■□□□ 1.14
Sox30Q8CGW4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sox30Q8CGW4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sox30Q8CGW4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sox30Q8CGW4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sox30Q8CGW4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sox30Q8CGW4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Sox30Q8CGW4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Sox30Q8CGW4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sox30Q8CGW4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.15■■□□□ 1.14
Sox30Q8CGW4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.15■■□□□ 1.14
Sox30Q8CGW4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC22.15■■□□□ 1.14
Sox30Q8CGW4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.15■■□□□ 1.14
Sox30Q8CGW4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Sox30Q8CGW4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Sox30Q8CGW4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Sox30Q8CGW4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Sox30Q8CGW4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Sox30Q8CGW4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Sox30Q8CGW4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Sox30Q8CGW4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Sox30Q8CGW4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC22.14■■□□□ 1.13
Sox30Q8CGW4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Sox30Q8CGW4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC22.14■■□□□ 1.13
Sox30Q8CGW4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Sox30Q8CGW4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC22.14■■□□□ 1.13
Sox30Q8CGW4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Sox30Q8CGW4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Sox30Q8CGW4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Sox30Q8CGW4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Sox30Q8CGW4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.13■■□□□ 1.13
Sox30Q8CGW4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sox30Q8CGW4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sox30Q8CGW4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.12■■□□□ 1.13
Sox30Q8CGW4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sox30Q8CGW4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Sox30Q8CGW4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sox30Q8CGW4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Sox30Q8CGW4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sox30Q8CGW4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.12■■□□□ 1.13
Sox30Q8CGW4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.12■■□□□ 1.13
Sox30Q8CGW4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sox30Q8CGW4 Gm6802-201ENSMUST00000167843 1983 ntBASIC22.12■■□□□ 1.13
Sox30Q8CGW4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sox30Q8CGW4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC22.11■■□□□ 1.13
Sox30Q8CGW4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Sox30Q8CGW4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Sox30Q8CGW4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sox30Q8CGW4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.11■■□□□ 1.13
Sox30Q8CGW4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sox30Q8CGW4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sox30Q8CGW4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sox30Q8CGW4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Sox30Q8CGW4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sox30Q8CGW4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Sox30Q8CGW4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sox30Q8CGW4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Sox30Q8CGW4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sox30Q8CGW4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sox30Q8CGW4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sox30Q8CGW4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Sox30Q8CGW4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sox30Q8CGW4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sox30Q8CGW4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
Sox30Q8CGW4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sox30Q8CGW4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Sox30Q8CGW4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sox30Q8CGW4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC22.08■■□□□ 1.13
Sox30Q8CGW4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sox30Q8CGW4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sox30Q8CGW4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sox30Q8CGW4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Sox30Q8CGW4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sox30Q8CGW4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sox30Q8CGW4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Sox30Q8CGW4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Sox30Q8CGW4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sox30Q8CGW4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms