Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp28Q8CGV8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp28Q8CGV8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp28Q8CGV8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp28Q8CGV8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.07■□□□□ 0.32
Mmp28Q8CGV8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Mmp28Q8CGV8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Mmp28Q8CGV8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp28Q8CGV8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp28Q8CGV8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp28Q8CGV8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp28Q8CGV8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp28Q8CGV8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp28Q8CGV8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.06■□□□□ 0.32
Mmp28Q8CGV8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp28Q8CGV8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp28Q8CGV8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp28Q8CGV8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Mmp28Q8CGV8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp28Q8CGV8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp28Q8CGV8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp28Q8CGV8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.05■□□□□ 0.32
Mmp28Q8CGV8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.05■□□□□ 0.32
Mmp28Q8CGV8 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.05■□□□□ 0.32
Mmp28Q8CGV8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp28Q8CGV8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Mmp28Q8CGV8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp28Q8CGV8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp28Q8CGV8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp28Q8CGV8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp28Q8CGV8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp28Q8CGV8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Mmp28Q8CGV8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.04■□□□□ 0.32
Mmp28Q8CGV8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp28Q8CGV8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp28Q8CGV8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp28Q8CGV8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp28Q8CGV8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp28Q8CGV8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.03■□□□□ 0.32
Mmp28Q8CGV8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp28Q8CGV8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp28Q8CGV8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp28Q8CGV8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp28Q8CGV8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Mmp28Q8CGV8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp28Q8CGV8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp28Q8CGV8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.03■□□□□ 0.32
Mmp28Q8CGV8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Mmp28Q8CGV8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp28Q8CGV8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp28Q8CGV8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp28Q8CGV8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp28Q8CGV8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Mmp28Q8CGV8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp28Q8CGV8 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.02■□□□□ 0.32
Mmp28Q8CGV8 Gm27502-201ENSMUST00000183495 199 ntBASIC17.02■□□□□ 0.32
Mmp28Q8CGV8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp28Q8CGV8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp28Q8CGV8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp28Q8CGV8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp28Q8CGV8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Mmp28Q8CGV8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp28Q8CGV8 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.02■□□□□ 0.31
Mmp28Q8CGV8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp28Q8CGV8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.01■□□□□ 0.31
Mmp28Q8CGV8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp28Q8CGV8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp28Q8CGV8 Grk6-206ENSMUST00000224995 2971 ntBASIC17.01■□□□□ 0.31
Mmp28Q8CGV8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.01■□□□□ 0.31
Mmp28Q8CGV8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp28Q8CGV8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Mmp28Q8CGV8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp28Q8CGV8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp28Q8CGV8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp28Q8CGV8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp28Q8CGV8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp28Q8CGV8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp28Q8CGV8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp28Q8CGV8 Gm14523-201ENSMUST00000117260 558 ntBASIC17.01■□□□□ 0.31
Mmp28Q8CGV8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.01■□□□□ 0.31
Mmp28Q8CGV8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp28Q8CGV8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp28Q8CGV8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp28Q8CGV8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp28Q8CGV8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp28Q8CGV8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp28Q8CGV8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp28Q8CGV8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp28Q8CGV8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp28Q8CGV8 Gm5131-201ENSMUST00000212776 1238 ntBASIC17■□□□□ 0.31
Mmp28Q8CGV8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp28Q8CGV8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp28Q8CGV8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17■□□□□ 0.31
Mmp28Q8CGV8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp28Q8CGV8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Mmp28Q8CGV8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp28Q8CGV8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Mmp28Q8CGV8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp28Q8CGV8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp28Q8CGV8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms