Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC25.18■■□□□ 1.62
Trim52Q8CDV4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Trim52Q8CDV4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Trim52Q8CDV4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Trim52Q8CDV4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Trim52Q8CDV4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Trim52Q8CDV4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Trim52Q8CDV4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Trim52Q8CDV4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Trim52Q8CDV4 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
Trim52Q8CDV4 Gm26571-201ENSMUST00000181399 666 ntBASIC25.17■■□□□ 1.62
Trim52Q8CDV4 AC164629.5-201ENSMUST00000220387 632 ntBASIC25.17■■□□□ 1.62
Trim52Q8CDV4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Trim52Q8CDV4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
Trim52Q8CDV4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
Trim52Q8CDV4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Trim52Q8CDV4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Trim52Q8CDV4 Gm32051-202ENSMUST00000197905 2385 ntBASIC25.17■■□□□ 1.62
Trim52Q8CDV4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Trim52Q8CDV4 AC099934.2-201ENSMUST00000196389 70 ntBASIC25.16■■□□□ 1.62
Trim52Q8CDV4 AC156953.1-201ENSMUST00000196953 70 ntBASIC25.16■■□□□ 1.62
Trim52Q8CDV4 AC157822.2-201ENSMUST00000200291 70 ntBASIC25.16■■□□□ 1.62
Trim52Q8CDV4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Trim52Q8CDV4 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Trim52Q8CDV4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Trim52Q8CDV4 Gm10849-201ENSMUST00000100397 618 ntBASIC25.15■■□□□ 1.62
Trim52Q8CDV4 Gm11421-201ENSMUST00000122124 294 ntBASIC25.15■■□□□ 1.62
Trim52Q8CDV4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC25.15■■□□□ 1.62
Trim52Q8CDV4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Trim52Q8CDV4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Trim52Q8CDV4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Trim52Q8CDV4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Trim52Q8CDV4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC25.14■■□□□ 1.62
Trim52Q8CDV4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Trim52Q8CDV4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Trim52Q8CDV4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Trim52Q8CDV4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
Trim52Q8CDV4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Trim52Q8CDV4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Trim52Q8CDV4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Trim52Q8CDV4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trim52Q8CDV4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trim52Q8CDV4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trim52Q8CDV4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trim52Q8CDV4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trim52Q8CDV4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Trim52Q8CDV4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trim52Q8CDV4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trim52Q8CDV4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Trim52Q8CDV4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC25.12■■□□□ 1.61
Trim52Q8CDV4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trim52Q8CDV4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trim52Q8CDV4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trim52Q8CDV4 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Trim52Q8CDV4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trim52Q8CDV4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC25.12■■□□□ 1.61
Trim52Q8CDV4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trim52Q8CDV4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC25.11■■□□□ 1.61
Trim52Q8CDV4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Trim52Q8CDV4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Trim52Q8CDV4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Trim52Q8CDV4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Trim52Q8CDV4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Trim52Q8CDV4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Trim52Q8CDV4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Trim52Q8CDV4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Trim52Q8CDV4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Trim52Q8CDV4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
Trim52Q8CDV4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Trim52Q8CDV4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC25.09■■□□□ 1.61
Trim52Q8CDV4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC25.08■■□□□ 1.61
Trim52Q8CDV4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
Trim52Q8CDV4 Gm42642-201ENSMUST00000200683 355 ntBASIC25.08■■□□□ 1.61
Trim52Q8CDV4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC25.08■■□□□ 1.61
Trim52Q8CDV4 Gm7291-201ENSMUST00000199147 382 ntBASIC25.07■■□□□ 1.6
Trim52Q8CDV4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Trim52Q8CDV4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Trim52Q8CDV4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Trim52Q8CDV4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Trim52Q8CDV4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Trim52Q8CDV4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Trim52Q8CDV4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Trim52Q8CDV4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
Trim52Q8CDV4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Trim52Q8CDV4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Trim52Q8CDV4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
Trim52Q8CDV4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC25.06■■□□□ 1.6
Trim52Q8CDV4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
Trim52Q8CDV4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Trim52Q8CDV4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Trim52Q8CDV4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Trim52Q8CDV4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC25.05■■□□□ 1.6
Trim52Q8CDV4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Trim52Q8CDV4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
Trim52Q8CDV4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Trim52Q8CDV4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Trim52Q8CDV4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Trim52Q8CDV4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
Trim52Q8CDV4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Trim52Q8CDV4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms