Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Shisa4Q8CA71 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Shisa4Q8CA71 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Shisa4Q8CA71 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Shisa4Q8CA71 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Shisa4Q8CA71 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
Shisa4Q8CA71 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Shisa4Q8CA71 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Shisa4Q8CA71 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Shisa4Q8CA71 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC23.64■■□□□ 1.37
Shisa4Q8CA71 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Shisa4Q8CA71 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Shisa4Q8CA71 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Shisa4Q8CA71 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Shisa4Q8CA71 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Shisa4Q8CA71 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC23.64■■□□□ 1.37
Shisa4Q8CA71 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Shisa4Q8CA71 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Shisa4Q8CA71 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Shisa4Q8CA71 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Shisa4Q8CA71 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Shisa4Q8CA71 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Shisa4Q8CA71 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Shisa4Q8CA71 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Shisa4Q8CA71 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Shisa4Q8CA71 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Shisa4Q8CA71 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC23.62■■□□□ 1.37
Shisa4Q8CA71 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Shisa4Q8CA71 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Shisa4Q8CA71 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC23.62■■□□□ 1.37
Shisa4Q8CA71 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Shisa4Q8CA71 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Shisa4Q8CA71 Gm45417-201ENSMUST00000209533 758 ntBASIC23.62■■□□□ 1.37
Shisa4Q8CA71 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Shisa4Q8CA71 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC23.62■■□□□ 1.37
Shisa4Q8CA71 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Shisa4Q8CA71 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Shisa4Q8CA71 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Shisa4Q8CA71 Gm27045-201ENSMUST00000182145 1402 ntBASIC23.61■■□□□ 1.37
Shisa4Q8CA71 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Shisa4Q8CA71 Gm12251-201ENSMUST00000117893 792 ntBASIC23.61■■□□□ 1.37
Shisa4Q8CA71 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC23.61■■□□□ 1.37
Shisa4Q8CA71 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23.61■■□□□ 1.37
Shisa4Q8CA71 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Shisa4Q8CA71 Hsf1-207ENSMUST00000228371 2102 ntBASIC23.6■■□□□ 1.37
Shisa4Q8CA71 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
Shisa4Q8CA71 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Shisa4Q8CA71 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC23.6■■□□□ 1.37
Shisa4Q8CA71 Gm8495-201ENSMUST00000188740 694 ntBASIC23.6■■□□□ 1.37
Shisa4Q8CA71 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC23.6■■□□□ 1.37
Shisa4Q8CA71 Gm43137-201ENSMUST00000198052 594 ntBASIC23.6■■□□□ 1.37
Shisa4Q8CA71 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Shisa4Q8CA71 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Shisa4Q8CA71 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Shisa4Q8CA71 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC23.6■■□□□ 1.37
Shisa4Q8CA71 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Shisa4Q8CA71 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Shisa4Q8CA71 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Shisa4Q8CA71 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Shisa4Q8CA71 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Shisa4Q8CA71 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Shisa4Q8CA71 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Shisa4Q8CA71 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Shisa4Q8CA71 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Shisa4Q8CA71 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Shisa4Q8CA71 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC23.58■■□□□ 1.37
Shisa4Q8CA71 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC23.58■■□□□ 1.37
Shisa4Q8CA71 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Shisa4Q8CA71 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Shisa4Q8CA71 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Shisa4Q8CA71 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC23.58■■□□□ 1.36
Shisa4Q8CA71 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Shisa4Q8CA71 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Shisa4Q8CA71 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Shisa4Q8CA71 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Shisa4Q8CA71 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Shisa4Q8CA71 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Shisa4Q8CA71 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
Shisa4Q8CA71 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Shisa4Q8CA71 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Shisa4Q8CA71 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Shisa4Q8CA71 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Shisa4Q8CA71 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Shisa4Q8CA71 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Shisa4Q8CA71 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Shisa4Q8CA71 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.55■■□□□ 1.36
Shisa4Q8CA71 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Shisa4Q8CA71 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC23.55■■□□□ 1.36
Shisa4Q8CA71 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC23.55■■□□□ 1.36
Shisa4Q8CA71 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Shisa4Q8CA71 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Shisa4Q8CA71 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Shisa4Q8CA71 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Shisa4Q8CA71 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC23.55■■□□□ 1.36
Shisa4Q8CA71 Gm6085-201ENSMUST00000182774 1470 ntBASIC23.55■■□□□ 1.36
Shisa4Q8CA71 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Shisa4Q8CA71 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC23.55■■□□□ 1.36
Shisa4Q8CA71 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC23.54■■□□□ 1.36
Shisa4Q8CA71 Gm43759-201ENSMUST00000196925 1261 ntBASIC23.54■■□□□ 1.36
Shisa4Q8CA71 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms