Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rd3Q8BRE0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rd3Q8BRE0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rd3Q8BRE0 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.4■■□□□ 1.02
Rd3Q8BRE0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rd3Q8BRE0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.4■■□□□ 1.02
Rd3Q8BRE0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rd3Q8BRE0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rd3Q8BRE0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rd3Q8BRE0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rd3Q8BRE0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rd3Q8BRE0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rd3Q8BRE0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rd3Q8BRE0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rd3Q8BRE0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Rd3Q8BRE0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Rd3Q8BRE0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rd3Q8BRE0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.39■■□□□ 1.01
Rd3Q8BRE0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.39■■□□□ 1.01
Rd3Q8BRE0 Smad6-203ENSMUST00000179458 273 ntBASIC21.39■■□□□ 1.01
Rd3Q8BRE0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Rd3Q8BRE0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rd3Q8BRE0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rd3Q8BRE0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rd3Q8BRE0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rd3Q8BRE0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rd3Q8BRE0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.38■■□□□ 1.01
Rd3Q8BRE0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rd3Q8BRE0 Gm42569-201ENSMUST00000200539 472 ntBASIC21.38■■□□□ 1.01
Rd3Q8BRE0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Rd3Q8BRE0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rd3Q8BRE0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
Rd3Q8BRE0 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.37■■□□□ 1.01
Rd3Q8BRE0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rd3Q8BRE0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
Rd3Q8BRE0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.37■■□□□ 1.01
Rd3Q8BRE0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.37■■□□□ 1.01
Rd3Q8BRE0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Rd3Q8BRE0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.37■■□□□ 1.01
Rd3Q8BRE0 Gm42642-201ENSMUST00000200683 355 ntBASIC21.37■■□□□ 1.01
Rd3Q8BRE0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rd3Q8BRE0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rd3Q8BRE0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rd3Q8BRE0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rd3Q8BRE0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rd3Q8BRE0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rd3Q8BRE0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.36■■□□□ 1.01
Rd3Q8BRE0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rd3Q8BRE0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rd3Q8BRE0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rd3Q8BRE0 Gm26571-201ENSMUST00000181399 666 ntBASIC21.36■■□□□ 1.01
Rd3Q8BRE0 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.36■■□□□ 1.01
Rd3Q8BRE0 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.36■■□□□ 1.01
Rd3Q8BRE0 Gm7291-201ENSMUST00000199147 382 ntBASIC21.36■■□□□ 1.01
Rd3Q8BRE0 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.36■■□□□ 1.01
Rd3Q8BRE0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rd3Q8BRE0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rd3Q8BRE0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rd3Q8BRE0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rd3Q8BRE0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.35■■□□□ 1.01
Rd3Q8BRE0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Rd3Q8BRE0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rd3Q8BRE0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rd3Q8BRE0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.34■■□□□ 1.01
Rd3Q8BRE0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rd3Q8BRE0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.34■■□□□ 1.01
Rd3Q8BRE0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.34■■□□□ 1.01
Rd3Q8BRE0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rd3Q8BRE0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rd3Q8BRE0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Rd3Q8BRE0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.34■■□□□ 1.01
Rd3Q8BRE0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rd3Q8BRE0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rd3Q8BRE0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Rd3Q8BRE0 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.34■■□□□ 1.01
Rd3Q8BRE0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rd3Q8BRE0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Rd3Q8BRE0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rd3Q8BRE0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rd3Q8BRE0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rd3Q8BRE0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rd3Q8BRE0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rd3Q8BRE0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Rd3Q8BRE0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.33■■□□□ 1.01
Rd3Q8BRE0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rd3Q8BRE0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.33■■□□□ 1.01
Rd3Q8BRE0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.33■■□□□ 1.01
Rd3Q8BRE0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rd3Q8BRE0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Rd3Q8BRE0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
Rd3Q8BRE0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rd3Q8BRE0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rd3Q8BRE0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
Rd3Q8BRE0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Rd3Q8BRE0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Rd3Q8BRE0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rd3Q8BRE0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.32■■□□□ 1
Rd3Q8BRE0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Rd3Q8BRE0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rd3Q8BRE0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms