Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Depdc1bQ8BH88 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Depdc1bQ8BH88 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Depdc1bQ8BH88 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.82■■□□□ 1.08
Depdc1bQ8BH88 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Depdc1bQ8BH88 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.82■■□□□ 1.08
Depdc1bQ8BH88 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Depdc1bQ8BH88 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Depdc1bQ8BH88 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Depdc1bQ8BH88 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Depdc1bQ8BH88 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Depdc1bQ8BH88 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Depdc1bQ8BH88 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.81■■□□□ 1.08
Depdc1bQ8BH88 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Depdc1bQ8BH88 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Depdc1bQ8BH88 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Depdc1bQ8BH88 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Depdc1bQ8BH88 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Depdc1bQ8BH88 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Depdc1bQ8BH88 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Depdc1bQ8BH88 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Depdc1bQ8BH88 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Depdc1bQ8BH88 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Depdc1bQ8BH88 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
Depdc1bQ8BH88 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Depdc1bQ8BH88 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Depdc1bQ8BH88 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Depdc1bQ8BH88 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.79■■□□□ 1.08
Depdc1bQ8BH88 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Depdc1bQ8BH88 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Depdc1bQ8BH88 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Depdc1bQ8BH88 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.78■■□□□ 1.08
Depdc1bQ8BH88 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Depdc1bQ8BH88 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Depdc1bQ8BH88 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Depdc1bQ8BH88 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Depdc1bQ8BH88 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.77■■□□□ 1.08
Depdc1bQ8BH88 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.77■■□□□ 1.08
Depdc1bQ8BH88 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Depdc1bQ8BH88 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Depdc1bQ8BH88 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Depdc1bQ8BH88 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Depdc1bQ8BH88 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.77■■□□□ 1.07
Depdc1bQ8BH88 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Depdc1bQ8BH88 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Depdc1bQ8BH88 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Depdc1bQ8BH88 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Depdc1bQ8BH88 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.76■■□□□ 1.07
Depdc1bQ8BH88 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Depdc1bQ8BH88 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.76■■□□□ 1.07
Depdc1bQ8BH88 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.76■■□□□ 1.07
Depdc1bQ8BH88 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Depdc1bQ8BH88 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.76■■□□□ 1.07
Depdc1bQ8BH88 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Depdc1bQ8BH88 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Depdc1bQ8BH88 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Depdc1bQ8BH88 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Depdc1bQ8BH88 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Depdc1bQ8BH88 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Depdc1bQ8BH88 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Depdc1bQ8BH88 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Depdc1bQ8BH88 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Depdc1bQ8BH88 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Depdc1bQ8BH88 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Depdc1bQ8BH88 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Depdc1bQ8BH88 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.75■■□□□ 1.07
Depdc1bQ8BH88 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Depdc1bQ8BH88 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Depdc1bQ8BH88 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Depdc1bQ8BH88 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Depdc1bQ8BH88 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Depdc1bQ8BH88 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Depdc1bQ8BH88 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Depdc1bQ8BH88 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Depdc1bQ8BH88 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.74■■□□□ 1.07
Depdc1bQ8BH88 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Depdc1bQ8BH88 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Depdc1bQ8BH88 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Depdc1bQ8BH88 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Depdc1bQ8BH88 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Depdc1bQ8BH88 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Depdc1bQ8BH88 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.73■■□□□ 1.07
Depdc1bQ8BH88 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.73■■□□□ 1.07
Depdc1bQ8BH88 Golgb1-201ENSMUST00000023534 498 ntBASIC21.73■■□□□ 1.07
Depdc1bQ8BH88 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Depdc1bQ8BH88 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.73■■□□□ 1.07
Depdc1bQ8BH88 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Depdc1bQ8BH88 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Depdc1bQ8BH88 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Depdc1bQ8BH88 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.72■■□□□ 1.07
Depdc1bQ8BH88 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.72■■□□□ 1.07
Depdc1bQ8BH88 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Depdc1bQ8BH88 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.72■■□□□ 1.07
Depdc1bQ8BH88 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Depdc1bQ8BH88 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Depdc1bQ8BH88 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Depdc1bQ8BH88 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Depdc1bQ8BH88 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Depdc1bQ8BH88 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Depdc1bQ8BH88 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms