Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
Prpf40bQ80W14 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Prpf40bQ80W14 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Prpf40bQ80W14 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Prpf40bQ80W14 Gm10657-201ENSMUST00000193528 1031 ntBASIC23.2■■□□□ 1.3
Prpf40bQ80W14 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Prpf40bQ80W14 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Prpf40bQ80W14 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Prpf40bQ80W14 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Prpf40bQ80W14 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Prpf40bQ80W14 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Prpf40bQ80W14 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Prpf40bQ80W14 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Prpf40bQ80W14 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Prpf40bQ80W14 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Prpf40bQ80W14 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Prpf40bQ80W14 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
Prpf40bQ80W14 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Prpf40bQ80W14 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Prpf40bQ80W14 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Prpf40bQ80W14 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC23.18■■□□□ 1.3
Prpf40bQ80W14 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Prpf40bQ80W14 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Prpf40bQ80W14 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Prpf40bQ80W14 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC23.17■■□□□ 1.3
Prpf40bQ80W14 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Prpf40bQ80W14 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Prpf40bQ80W14 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Prpf40bQ80W14 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Prpf40bQ80W14 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Prpf40bQ80W14 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Prpf40bQ80W14 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Prpf40bQ80W14 Gm43759-201ENSMUST00000196925 1261 ntBASIC23.16■■□□□ 1.3
Prpf40bQ80W14 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Prpf40bQ80W14 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Prpf40bQ80W14 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Prpf40bQ80W14 AC158990.1-201ENSMUST00000221450 2016 ntBASIC23.16■■□□□ 1.3
Prpf40bQ80W14 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Prpf40bQ80W14 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Prpf40bQ80W14 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Prpf40bQ80W14 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC23.15■■□□□ 1.3
Prpf40bQ80W14 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC23.15■■□□□ 1.3
Prpf40bQ80W14 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Prpf40bQ80W14 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Prpf40bQ80W14 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Prpf40bQ80W14 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Prpf40bQ80W14 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Prpf40bQ80W14 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Prpf40bQ80W14 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Prpf40bQ80W14 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
Prpf40bQ80W14 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Prpf40bQ80W14 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC23.14■■□□□ 1.29
Prpf40bQ80W14 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Prpf40bQ80W14 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC23.14■■□□□ 1.29
Prpf40bQ80W14 Gm7160-202ENSMUST00000188519 1027 ntBASIC23.14■■□□□ 1.29
Prpf40bQ80W14 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC23.14■■□□□ 1.29
Prpf40bQ80W14 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Prpf40bQ80W14 AC124392.1-201ENSMUST00000225172 5324 ntBASIC23.13■■□□□ 1.29
Prpf40bQ80W14 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Prpf40bQ80W14 Gm6085-201ENSMUST00000182774 1470 ntBASIC23.13■■□□□ 1.29
Prpf40bQ80W14 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Prpf40bQ80W14 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Prpf40bQ80W14 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Prpf40bQ80W14 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Prpf40bQ80W14 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Prpf40bQ80W14 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Prpf40bQ80W14 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Prpf40bQ80W14 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Prpf40bQ80W14 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Prpf40bQ80W14 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Prpf40bQ80W14 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC23.12■■□□□ 1.29
Prpf40bQ80W14 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Prpf40bQ80W14 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Prpf40bQ80W14 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Prpf40bQ80W14 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC23.12■■□□□ 1.29
Prpf40bQ80W14 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Prpf40bQ80W14 Gm10129-202ENSMUST00000193100 1316 ntBASIC23.11■■□□□ 1.29
Prpf40bQ80W14 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Prpf40bQ80W14 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Prpf40bQ80W14 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC23.11■■□□□ 1.29
Prpf40bQ80W14 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Prpf40bQ80W14 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
Prpf40bQ80W14 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC23.11■■□□□ 1.29
Prpf40bQ80W14 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Prpf40bQ80W14 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Prpf40bQ80W14 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Prpf40bQ80W14 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC23.1■■□□□ 1.29
Prpf40bQ80W14 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
Prpf40bQ80W14 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Prpf40bQ80W14 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Prpf40bQ80W14 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Prpf40bQ80W14 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Prpf40bQ80W14 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Prpf40bQ80W14 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC23.09■■□□□ 1.29
Prpf40bQ80W14 Gm43403-201ENSMUST00000198011 1786 ntBASIC23.09■■□□□ 1.29
Prpf40bQ80W14 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Prpf40bQ80W14 Gm40848-201ENSMUST00000221998 324 ntBASIC23.09■■□□□ 1.29
Prpf40bQ80W14 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Prpf40bQ80W14 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Prpf40bQ80W14 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms