Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh8Q7TSK3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh8Q7TSK3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh8Q7TSK3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh8Q7TSK3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Pcdh8Q7TSK3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh8Q7TSK3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh8Q7TSK3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh8Q7TSK3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh8Q7TSK3 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.81■□□□□ 0.76
Pcdh8Q7TSK3 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.81■□□□□ 0.76
Pcdh8Q7TSK3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh8Q7TSK3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Pcdh8Q7TSK3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh8Q7TSK3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.81■□□□□ 0.76
Pcdh8Q7TSK3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh8Q7TSK3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh8Q7TSK3 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.8■□□□□ 0.76
Pcdh8Q7TSK3 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.8■□□□□ 0.76
Pcdh8Q7TSK3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh8Q7TSK3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pcdh8Q7TSK3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Pcdh8Q7TSK3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh8Q7TSK3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh8Q7TSK3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.79■□□□□ 0.76
Pcdh8Q7TSK3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh8Q7TSK3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Pcdh8Q7TSK3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh8Q7TSK3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Pcdh8Q7TSK3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pcdh8Q7TSK3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Pcdh8Q7TSK3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.79■□□□□ 0.76
Pcdh8Q7TSK3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh8Q7TSK3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh8Q7TSK3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh8Q7TSK3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh8Q7TSK3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh8Q7TSK3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh8Q7TSK3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh8Q7TSK3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.78■□□□□ 0.76
Pcdh8Q7TSK3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Pcdh8Q7TSK3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh8Q7TSK3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh8Q7TSK3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh8Q7TSK3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh8Q7TSK3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh8Q7TSK3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh8Q7TSK3 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.78■□□□□ 0.76
Pcdh8Q7TSK3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdh8Q7TSK3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdh8Q7TSK3 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.77■□□□□ 0.76
Pcdh8Q7TSK3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.77■□□□□ 0.76
Pcdh8Q7TSK3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdh8Q7TSK3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdh8Q7TSK3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh8Q7TSK3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh8Q7TSK3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh8Q7TSK3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh8Q7TSK3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Pcdh8Q7TSK3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.76■□□□□ 0.75
Pcdh8Q7TSK3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh8Q7TSK3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh8Q7TSK3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh8Q7TSK3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.76■□□□□ 0.75
Pcdh8Q7TSK3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.76■□□□□ 0.75
Pcdh8Q7TSK3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh8Q7TSK3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Pcdh8Q7TSK3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Pcdh8Q7TSK3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
Pcdh8Q7TSK3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Pcdh8Q7TSK3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh8Q7TSK3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh8Q7TSK3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Pcdh8Q7TSK3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh8Q7TSK3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.75■□□□□ 0.75
Pcdh8Q7TSK3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.75■□□□□ 0.75
Pcdh8Q7TSK3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh8Q7TSK3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
Pcdh8Q7TSK3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh8Q7TSK3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Pcdh8Q7TSK3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh8Q7TSK3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.75■□□□□ 0.75
Pcdh8Q7TSK3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh8Q7TSK3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh8Q7TSK3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh8Q7TSK3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh8Q7TSK3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Pcdh8Q7TSK3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh8Q7TSK3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh8Q7TSK3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh8Q7TSK3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.74■□□□□ 0.75
Pcdh8Q7TSK3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh8Q7TSK3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh8Q7TSK3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh8Q7TSK3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh8Q7TSK3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh8Q7TSK3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh8Q7TSK3 Notumos-201ENSMUST00000151998 2659 ntBASIC19.74■□□□□ 0.75
Pcdh8Q7TSK3 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.73■□□□□ 0.75
Pcdh8Q7TSK3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms