Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Kdm1aQ6ZQ88 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Kdm1aQ6ZQ88 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Kdm1aQ6ZQ88 Gm34220-201ENSMUST00000223001 2709 ntBASIC22.28■■□□□ 1.16
Kdm1aQ6ZQ88 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Kdm1aQ6ZQ88 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Kdm1aQ6ZQ88 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Kdm1aQ6ZQ88 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Kdm1aQ6ZQ88 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
Kdm1aQ6ZQ88 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Kdm1aQ6ZQ88 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Kdm1aQ6ZQ88 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Kdm1aQ6ZQ88 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
Kdm1aQ6ZQ88 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
Kdm1aQ6ZQ88 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Kdm1aQ6ZQ88 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Kdm1aQ6ZQ88 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Kdm1aQ6ZQ88 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC22.25■■□□□ 1.15
Kdm1aQ6ZQ88 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.25■■□□□ 1.15
Kdm1aQ6ZQ88 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Kdm1aQ6ZQ88 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Kdm1aQ6ZQ88 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Kdm1aQ6ZQ88 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Kdm1aQ6ZQ88 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Kdm1aQ6ZQ88 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Kdm1aQ6ZQ88 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Kdm1aQ6ZQ88 Gm7417-201ENSMUST00000192950 473 ntBASIC22.24■■□□□ 1.15
Kdm1aQ6ZQ88 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Kdm1aQ6ZQ88 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Kdm1aQ6ZQ88 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Kdm1aQ6ZQ88 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC22.23■■□□□ 1.15
Kdm1aQ6ZQ88 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC22.23■■□□□ 1.15
Kdm1aQ6ZQ88 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Kdm1aQ6ZQ88 AC166356.1-201ENSMUST00000228236 1426 ntBASIC22.23■■□□□ 1.15
Kdm1aQ6ZQ88 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Kdm1aQ6ZQ88 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.22■■□□□ 1.15
Kdm1aQ6ZQ88 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Kdm1aQ6ZQ88 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Kdm1aQ6ZQ88 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
Kdm1aQ6ZQ88 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Kdm1aQ6ZQ88 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Kdm1aQ6ZQ88 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Kdm1aQ6ZQ88 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Kdm1aQ6ZQ88 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Kdm1aQ6ZQ88 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.21■■□□□ 1.15
Kdm1aQ6ZQ88 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Kdm1aQ6ZQ88 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Kdm1aQ6ZQ88 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Kdm1aQ6ZQ88 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Kdm1aQ6ZQ88 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Kdm1aQ6ZQ88 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Kdm1aQ6ZQ88 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Kdm1aQ6ZQ88 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Kdm1aQ6ZQ88 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Kdm1aQ6ZQ88 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Kdm1aQ6ZQ88 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.2■■□□□ 1.14
Kdm1aQ6ZQ88 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Kdm1aQ6ZQ88 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Kdm1aQ6ZQ88 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Kdm1aQ6ZQ88 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Kdm1aQ6ZQ88 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Kdm1aQ6ZQ88 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Kdm1aQ6ZQ88 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Kdm1aQ6ZQ88 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Kdm1aQ6ZQ88 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Kdm1aQ6ZQ88 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC22.19■■□□□ 1.14
Kdm1aQ6ZQ88 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Kdm1aQ6ZQ88 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Kdm1aQ6ZQ88 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC22.19■■□□□ 1.14
Kdm1aQ6ZQ88 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Kdm1aQ6ZQ88 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Kdm1aQ6ZQ88 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Kdm1aQ6ZQ88 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Kdm1aQ6ZQ88 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Kdm1aQ6ZQ88 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Kdm1aQ6ZQ88 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Kdm1aQ6ZQ88 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Kdm1aQ6ZQ88 Etf1-202ENSMUST00000180351 108 ntBASIC22.18■■□□□ 1.14
Kdm1aQ6ZQ88 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Kdm1aQ6ZQ88 Gm9870-201ENSMUST00000063874 645 ntBASIC22.18■■□□□ 1.14
Kdm1aQ6ZQ88 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Kdm1aQ6ZQ88 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Kdm1aQ6ZQ88 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC22.18■■□□□ 1.14
Kdm1aQ6ZQ88 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Kdm1aQ6ZQ88 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Kdm1aQ6ZQ88 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Kdm1aQ6ZQ88 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Kdm1aQ6ZQ88 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Kdm1aQ6ZQ88 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Kdm1aQ6ZQ88 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC22.17■■□□□ 1.14
Kdm1aQ6ZQ88 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Kdm1aQ6ZQ88 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Kdm1aQ6ZQ88 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Kdm1aQ6ZQ88 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Kdm1aQ6ZQ88 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC22.17■■□□□ 1.14
Kdm1aQ6ZQ88 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Kdm1aQ6ZQ88 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC22.17■■□□□ 1.14
Kdm1aQ6ZQ88 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Kdm1aQ6ZQ88 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC22.16■■□□□ 1.14
Kdm1aQ6ZQ88 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms