Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox16Q62247 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC11.53□□□□□ -0.56
Sox16Q62247 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox16Q62247 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox16Q62247 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC11.53□□□□□ -0.56
Sox16Q62247 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox16Q62247 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox16Q62247 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox16Q62247 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox16Q62247 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox16Q62247 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Sox16Q62247 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox16Q62247 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox16Q62247 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox16Q62247 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Sox16Q62247 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC11.53□□□□□ -0.56
Sox16Q62247 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox16Q62247 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Sox16Q62247 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox16Q62247 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox16Q62247 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC11.52□□□□□ -0.56
Sox16Q62247 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Sox16Q62247 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC11.52□□□□□ -0.56
Sox16Q62247 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
Sox16Q62247 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox16Q62247 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox16Q62247 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox16Q62247 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox16Q62247 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox16Q62247 Grk6-206ENSMUST00000224995 2971 ntBASIC11.52□□□□□ -0.57
Sox16Q62247 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sox16Q62247 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox16Q62247 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox16Q62247 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox16Q62247 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox16Q62247 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Sox16Q62247 Gm25239-201ENSMUST00000174915 86 ntBASIC11.51□□□□□ -0.57
Sox16Q62247 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox16Q62247 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox16Q62247 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox16Q62247 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox16Q62247 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox16Q62247 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox16Q62247 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox16Q62247 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox16Q62247 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox16Q62247 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox16Q62247 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox16Q62247 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Sox16Q62247 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox16Q62247 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox16Q62247 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox16Q62247 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox16Q62247 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox16Q62247 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox16Q62247 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox16Q62247 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox16Q62247 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC11.5□□□□□ -0.57
Sox16Q62247 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
Sox16Q62247 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox16Q62247 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox16Q62247 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox16Q62247 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox16Q62247 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox16Q62247 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Sox16Q62247 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox16Q62247 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox16Q62247 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox16Q62247 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox16Q62247 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Sox16Q62247 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sox16Q62247 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Sox16Q62247 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox16Q62247 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sox16Q62247 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox16Q62247 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox16Q62247 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox16Q62247 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC11.49□□□□□ -0.57
Sox16Q62247 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC11.49□□□□□ -0.57
Sox16Q62247 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox16Q62247 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox16Q62247 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Sox16Q62247 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sox16Q62247 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox16Q62247 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sox16Q62247 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox16Q62247 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox16Q62247 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox16Q62247 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sox16Q62247 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox16Q62247 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox16Q62247 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Sox16Q62247 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox16Q62247 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox16Q62247 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sox16Q62247 Gm44832-201ENSMUST00000208849 2303 ntBASIC11.48□□□□□ -0.57
Sox16Q62247 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sox16Q62247 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox16Q62247 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox16Q62247 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms