Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Scn9aQ62205 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Scn9aQ62205 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Scn9aQ62205 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC24.24■■□□□ 1.47
Scn9aQ62205 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC24.24■■□□□ 1.47
Scn9aQ62205 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Scn9aQ62205 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Scn9aQ62205 Gm14281-201ENSMUST00000121700 1294 ntBASIC24.23■■□□□ 1.47
Scn9aQ62205 Gm12441-201ENSMUST00000121806 588 ntBASIC24.23■■□□□ 1.47
Scn9aQ62205 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Scn9aQ62205 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Scn9aQ62205 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Scn9aQ62205 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC24.22■■□□□ 1.47
Scn9aQ62205 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Scn9aQ62205 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Scn9aQ62205 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC24.22■■□□□ 1.47
Scn9aQ62205 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC24.22■■□□□ 1.47
Scn9aQ62205 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
Scn9aQ62205 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Scn9aQ62205 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Scn9aQ62205 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
Scn9aQ62205 Gm10653-202ENSMUST00000139570 835 ntBASIC24.21■■□□□ 1.47
Scn9aQ62205 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Scn9aQ62205 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
Scn9aQ62205 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Scn9aQ62205 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Scn9aQ62205 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Scn9aQ62205 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Scn9aQ62205 Gm37415-201ENSMUST00000192265 2054 ntBASIC24.21■■□□□ 1.47
Scn9aQ62205 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC24.2■■□□□ 1.46
Scn9aQ62205 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Scn9aQ62205 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Scn9aQ62205 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Scn9aQ62205 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC24.2■■□□□ 1.46
Scn9aQ62205 Gm44949-201ENSMUST00000206423 1450 ntBASIC24.2■■□□□ 1.46
Scn9aQ62205 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Scn9aQ62205 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC24.2■■□□□ 1.46
Scn9aQ62205 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Scn9aQ62205 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
Scn9aQ62205 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Scn9aQ62205 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Scn9aQ62205 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Scn9aQ62205 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Scn9aQ62205 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC24.18■■□□□ 1.46
Scn9aQ62205 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Scn9aQ62205 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Scn9aQ62205 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC24.18■■□□□ 1.46
Scn9aQ62205 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Scn9aQ62205 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Scn9aQ62205 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC24.18■■□□□ 1.46
Scn9aQ62205 Gm13234-201ENSMUST00000120010 747 ntBASIC24.18■■□□□ 1.46
Scn9aQ62205 Gm43403-201ENSMUST00000198011 1786 ntBASIC24.17■■□□□ 1.46
Scn9aQ62205 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Scn9aQ62205 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Scn9aQ62205 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC24.16■■□□□ 1.46
Scn9aQ62205 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Scn9aQ62205 Ap3s1-204ENSMUST00000225520 957 ntBASIC24.16■■□□□ 1.46
Scn9aQ62205 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC24.16■■□□□ 1.46
Scn9aQ62205 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
Scn9aQ62205 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Scn9aQ62205 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC24.16■■□□□ 1.46
Scn9aQ62205 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Scn9aQ62205 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Scn9aQ62205 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
Scn9aQ62205 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC24.15■■□□□ 1.46
Scn9aQ62205 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC24.15■■□□□ 1.46
Scn9aQ62205 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC24.15■■□□□ 1.46
Scn9aQ62205 Gm9988-201ENSMUST00000069786 435 ntBASIC24.15■■□□□ 1.46
Scn9aQ62205 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Scn9aQ62205 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC24.14■■□□□ 1.46
Scn9aQ62205 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC24.14■■□□□ 1.46
Scn9aQ62205 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Scn9aQ62205 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Scn9aQ62205 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
Scn9aQ62205 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Scn9aQ62205 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Scn9aQ62205 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Scn9aQ62205 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
Scn9aQ62205 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Scn9aQ62205 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Scn9aQ62205 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC24.12■■□□□ 1.45
Scn9aQ62205 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Scn9aQ62205 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Scn9aQ62205 Reep4-203ENSMUST00000226563 1444 ntBASIC24.12■■□□□ 1.45
Scn9aQ62205 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Scn9aQ62205 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Scn9aQ62205 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC24.12■■□□□ 1.45
Scn9aQ62205 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC24.12■■□□□ 1.45
Scn9aQ62205 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Scn9aQ62205 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Scn9aQ62205 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
Scn9aQ62205 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Scn9aQ62205 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Scn9aQ62205 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC24.11■■□□□ 1.45
Scn9aQ62205 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC24.11■■□□□ 1.45
Scn9aQ62205 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Scn9aQ62205 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
Scn9aQ62205 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC24.1■■□□□ 1.45
Scn9aQ62205 Gm4968-201ENSMUST00000071458 858 ntBASIC24.1■■□□□ 1.45
Scn9aQ62205 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms