Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox17Q61473 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox17Q61473 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox17Q61473 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox17Q61473 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox17Q61473 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.85■□□□□ 0.61
Sox17Q61473 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox17Q61473 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sox17Q61473 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox17Q61473 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.85■□□□□ 0.61
Sox17Q61473 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox17Q61473 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox17Q61473 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Sox17Q61473 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
Sox17Q61473 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox17Q61473 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox17Q61473 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox17Q61473 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sox17Q61473 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Sox17Q61473 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sox17Q61473 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sox17Q61473 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox17Q61473 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox17Q61473 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox17Q61473 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sox17Q61473 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox17Q61473 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox17Q61473 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.84■□□□□ 0.61
Sox17Q61473 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox17Q61473 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox17Q61473 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox17Q61473 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox17Q61473 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox17Q61473 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox17Q61473 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sox17Q61473 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox17Q61473 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Sox17Q61473 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox17Q61473 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox17Q61473 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.83■□□□□ 0.6
Sox17Q61473 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Sox17Q61473 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sox17Q61473 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Sox17Q61473 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox17Q61473 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sox17Q61473 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Sox17Q61473 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.82■□□□□ 0.6
Sox17Q61473 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox17Q61473 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Sox17Q61473 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sox17Q61473 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sox17Q61473 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox17Q61473 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox17Q61473 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox17Q61473 Golph3-205ENSMUST00000228671 2842 ntBASIC18.82■□□□□ 0.6
Sox17Q61473 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox17Q61473 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.81■□□□□ 0.6
Sox17Q61473 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox17Q61473 Gm7332-201ENSMUST00000118351 454 ntBASIC18.81■□□□□ 0.6
Sox17Q61473 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox17Q61473 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sox17Q61473 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Sox17Q61473 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sox17Q61473 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox17Q61473 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox17Q61473 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox17Q61473 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.81■□□□□ 0.6
Sox17Q61473 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sox17Q61473 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
Sox17Q61473 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sox17Q61473 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sox17Q61473 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox17Q61473 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox17Q61473 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Sox17Q61473 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Sox17Q61473 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox17Q61473 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.79■□□□□ 0.6
Sox17Q61473 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox17Q61473 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.79■□□□□ 0.6
Sox17Q61473 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox17Q61473 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox17Q61473 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.79■□□□□ 0.6
Sox17Q61473 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox17Q61473 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.79■□□□□ 0.6
Sox17Q61473 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox17Q61473 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox17Q61473 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sox17Q61473 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox17Q61473 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sox17Q61473 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Sox17Q61473 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox17Q61473 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Sox17Q61473 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Sox17Q61473 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox17Q61473 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Sox17Q61473 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox17Q61473 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sox17Q61473 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox17Q61473 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox17Q61473 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms