Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn4Q61418 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn4Q61418 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.43■□□□□ 0.54
Clcn4Q61418 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Clcn4Q61418 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.42■□□□□ 0.54
Clcn4Q61418 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn4Q61418 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn4Q61418 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn4Q61418 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn4Q61418 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.42■□□□□ 0.54
Clcn4Q61418 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.42■□□□□ 0.54
Clcn4Q61418 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn4Q61418 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn4Q61418 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn4Q61418 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn4Q61418 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn4Q61418 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn4Q61418 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn4Q61418 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn4Q61418 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn4Q61418 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn4Q61418 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.41■□□□□ 0.54
Clcn4Q61418 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.41■□□□□ 0.54
Clcn4Q61418 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.41■□□□□ 0.54
Clcn4Q61418 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn4Q61418 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn4Q61418 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Clcn4Q61418 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn4Q61418 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn4Q61418 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn4Q61418 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn4Q61418 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn4Q61418 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn4Q61418 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn4Q61418 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Clcn4Q61418 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn4Q61418 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn4Q61418 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn4Q61418 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Clcn4Q61418 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.4■□□□□ 0.54
Clcn4Q61418 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.4■□□□□ 0.54
Clcn4Q61418 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.4■□□□□ 0.54
Clcn4Q61418 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Clcn4Q61418 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn4Q61418 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn4Q61418 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn4Q61418 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn4Q61418 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn4Q61418 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.4■□□□□ 0.54
Clcn4Q61418 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Clcn4Q61418 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn4Q61418 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Clcn4Q61418 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn4Q61418 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn4Q61418 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.39■□□□□ 0.53
Clcn4Q61418 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn4Q61418 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn4Q61418 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn4Q61418 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn4Q61418 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn4Q61418 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.39■□□□□ 0.53
Clcn4Q61418 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn4Q61418 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.39■□□□□ 0.53
Clcn4Q61418 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn4Q61418 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn4Q61418 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Clcn4Q61418 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Clcn4Q61418 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn4Q61418 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn4Q61418 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn4Q61418 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.38■□□□□ 0.53
Clcn4Q61418 Gm40881-201ENSMUST00000223397 166 ntBASIC18.38■□□□□ 0.53
Clcn4Q61418 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn4Q61418 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn4Q61418 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Clcn4Q61418 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn4Q61418 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.37■□□□□ 0.53
Clcn4Q61418 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn4Q61418 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn4Q61418 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Clcn4Q61418 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.37■□□□□ 0.53
Clcn4Q61418 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn4Q61418 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.37■□□□□ 0.53
Clcn4Q61418 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn4Q61418 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn4Q61418 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.36■□□□□ 0.53
Clcn4Q61418 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.36■□□□□ 0.53
Clcn4Q61418 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn4Q61418 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn4Q61418 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Clcn4Q61418 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.36■□□□□ 0.53
Clcn4Q61418 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn4Q61418 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn4Q61418 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.36■□□□□ 0.53
Clcn4Q61418 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn4Q61418 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Clcn4Q61418 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn4Q61418 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn4Q61418 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn4Q61418 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms