Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-1Q5R1I8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-1Q5R1I8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-1Q5R1I8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-1Q5R1I8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Trav3-1Q5R1I8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC13.72□□□□□ -0.21
Trav3-1Q5R1I8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Trav3-1Q5R1I8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-1Q5R1I8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-1Q5R1I8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-1Q5R1I8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-1Q5R1I8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-1Q5R1I8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav3-1Q5R1I8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-1Q5R1I8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-1Q5R1I8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-1Q5R1I8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-1Q5R1I8 Gm45141-201ENSMUST00000206502 1888 ntBASIC13.72□□□□□ -0.21
Trav3-1Q5R1I8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trav3-1Q5R1I8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-1Q5R1I8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-1Q5R1I8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-1Q5R1I8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-1Q5R1I8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-1Q5R1I8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-1Q5R1I8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-1Q5R1I8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav3-1Q5R1I8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
Trav3-1Q5R1I8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav3-1Q5R1I8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav3-1Q5R1I8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-1Q5R1I8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Trav3-1Q5R1I8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-1Q5R1I8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-1Q5R1I8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-1Q5R1I8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-1Q5R1I8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-1Q5R1I8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3-1Q5R1I8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3-1Q5R1I8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3-1Q5R1I8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3-1Q5R1I8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3-1Q5R1I8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3-1Q5R1I8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3-1Q5R1I8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav3-1Q5R1I8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav3-1Q5R1I8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-1Q5R1I8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-1Q5R1I8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-1Q5R1I8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav3-1Q5R1I8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav3-1Q5R1I8 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-1Q5R1I8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-1Q5R1I8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-1Q5R1I8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-1Q5R1I8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-1Q5R1I8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-1Q5R1I8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-1Q5R1I8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-1Q5R1I8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav3-1Q5R1I8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-1Q5R1I8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-1Q5R1I8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-1Q5R1I8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-1Q5R1I8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-1Q5R1I8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-1Q5R1I8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-1Q5R1I8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav3-1Q5R1I8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-1Q5R1I8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-1Q5R1I8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-1Q5R1I8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-1Q5R1I8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Trav3-1Q5R1I8 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-1Q5R1I8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-1Q5R1I8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-1Q5R1I8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-1Q5R1I8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav3-1Q5R1I8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-1Q5R1I8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-1Q5R1I8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-1Q5R1I8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-1Q5R1I8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-1Q5R1I8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-1Q5R1I8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav3-1Q5R1I8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-1Q5R1I8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-1Q5R1I8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-1Q5R1I8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-1Q5R1I8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-1Q5R1I8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav3-1Q5R1I8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-1Q5R1I8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-1Q5R1I8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-1Q5R1I8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-1Q5R1I8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-1Q5R1I8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav3-1Q5R1I8 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.65□□□□□ -0.22
Trav3-1Q5R1I8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav3-1Q5R1I8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms