Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6d-4Q5R1I0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav6d-4Q5R1I0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6d-4Q5R1I0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav6d-4Q5R1I0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6d-4Q5R1I0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6d-4Q5R1I0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6d-4Q5R1I0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6d-4Q5R1I0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6d-4Q5R1I0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trav6d-4Q5R1I0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6d-4Q5R1I0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6d-4Q5R1I0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6d-4Q5R1I0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6d-4Q5R1I0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trav6d-4Q5R1I0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6d-4Q5R1I0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6d-4Q5R1I0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6d-4Q5R1I0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav6d-4Q5R1I0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav6d-4Q5R1I0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6d-4Q5R1I0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6d-4Q5R1I0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6d-4Q5R1I0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trav6d-4Q5R1I0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6d-4Q5R1I0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trav6d-4Q5R1I0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Trav6d-4Q5R1I0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6d-4Q5R1I0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trav6d-4Q5R1I0 Gm6139-201ENSMUST00000079261 882 ntBASIC16.92■□□□□ 0.3
Trav6d-4Q5R1I0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trav6d-4Q5R1I0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Trav6d-4Q5R1I0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trav6d-4Q5R1I0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6d-4Q5R1I0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6d-4Q5R1I0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6d-4Q5R1I0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trav6d-4Q5R1I0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6d-4Q5R1I0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trav6d-4Q5R1I0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Trav6d-4Q5R1I0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6d-4Q5R1I0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6d-4Q5R1I0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6d-4Q5R1I0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Trav6d-4Q5R1I0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6d-4Q5R1I0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6d-4Q5R1I0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6d-4Q5R1I0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav6d-4Q5R1I0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Trav6d-4Q5R1I0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Trav6d-4Q5R1I0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6d-4Q5R1I0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6d-4Q5R1I0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6d-4Q5R1I0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6d-4Q5R1I0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
Trav6d-4Q5R1I0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.89■□□□□ 0.29
Trav6d-4Q5R1I0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6d-4Q5R1I0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.89■□□□□ 0.29
Trav6d-4Q5R1I0 Mir6236-201ENSMUST00000184437 123 ntBASIC16.89■□□□□ 0.29
Trav6d-4Q5R1I0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6d-4Q5R1I0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.89■□□□□ 0.29
Trav6d-4Q5R1I0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6d-4Q5R1I0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Trav6d-4Q5R1I0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trav6d-4Q5R1I0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6d-4Q5R1I0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6d-4Q5R1I0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6d-4Q5R1I0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6d-4Q5R1I0 Gm8493-201ENSMUST00000196881 489 ntBASIC16.88■□□□□ 0.29
Trav6d-4Q5R1I0 Serp2-204ENSMUST00000228055 705 ntBASIC16.88■□□□□ 0.29
Trav6d-4Q5R1I0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6d-4Q5R1I0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6d-4Q5R1I0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6d-4Q5R1I0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6d-4Q5R1I0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6d-4Q5R1I0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6d-4Q5R1I0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6d-4Q5R1I0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6d-4Q5R1I0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6d-4Q5R1I0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6d-4Q5R1I0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.87■□□□□ 0.29
Trav6d-4Q5R1I0 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.87■□□□□ 0.29
Trav6d-4Q5R1I0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.87■□□□□ 0.29
Trav6d-4Q5R1I0 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.87■□□□□ 0.29
Trav6d-4Q5R1I0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trav6d-4Q5R1I0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6d-4Q5R1I0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.87■□□□□ 0.29
Trav6d-4Q5R1I0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trav6d-4Q5R1I0 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.87■□□□□ 0.29
Trav6d-4Q5R1I0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6d-4Q5R1I0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6d-4Q5R1I0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6d-4Q5R1I0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6d-4Q5R1I0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Trav6d-4Q5R1I0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6d-4Q5R1I0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.86■□□□□ 0.29
Trav6d-4Q5R1I0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.86■□□□□ 0.29
Trav6d-4Q5R1I0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6d-4Q5R1I0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6d-4Q5R1I0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 116.6 ms