Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav3-3Q5R1C3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC15.01□□□□□ -0.01
Trav3-3Q5R1C3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav3-3Q5R1C3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav3-3Q5R1C3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav3-3Q5R1C3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav3-3Q5R1C3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav3-3Q5R1C3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC15□□□□□ -0.01
Trav3-3Q5R1C3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav3-3Q5R1C3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav3-3Q5R1C3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav3-3Q5R1C3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15□□□□□ -0.01
Trav3-3Q5R1C3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Trav3-3Q5R1C3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav3-3Q5R1C3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav3-3Q5R1C3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav3-3Q5R1C3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav3-3Q5R1C3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav3-3Q5R1C3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC15□□□□□ -0.01
Trav3-3Q5R1C3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav3-3Q5R1C3 Gm7199-201ENSMUST00000118327 1485 ntBASIC15□□□□□ -0.01
Trav3-3Q5R1C3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav3-3Q5R1C3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC15□□□□□ -0.01
Trav3-3Q5R1C3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav3-3Q5R1C3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-3Q5R1C3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-3Q5R1C3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-3Q5R1C3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-3Q5R1C3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-3Q5R1C3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-3Q5R1C3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-3Q5R1C3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Trav3-3Q5R1C3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trav3-3Q5R1C3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-3Q5R1C3 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.99□□□□□ -0.01
Trav3-3Q5R1C3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-3Q5R1C3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-3Q5R1C3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-3Q5R1C3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-3Q5R1C3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav3-3Q5R1C3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3-3Q5R1C3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3-3Q5R1C3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3-3Q5R1C3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3-3Q5R1C3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3-3Q5R1C3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Trav3-3Q5R1C3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3-3Q5R1C3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3-3Q5R1C3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3-3Q5R1C3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3-3Q5R1C3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3-3Q5R1C3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav3-3Q5R1C3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3-3Q5R1C3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav3-3Q5R1C3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3-3Q5R1C3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3-3Q5R1C3 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.97□□□□□ -0.01
Trav3-3Q5R1C3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3-3Q5R1C3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3-3Q5R1C3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3-3Q5R1C3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3-3Q5R1C3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3-3Q5R1C3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav3-3Q5R1C3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav3-3Q5R1C3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Trav3-3Q5R1C3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav3-3Q5R1C3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav3-3Q5R1C3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav3-3Q5R1C3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav3-3Q5R1C3 Gm45364-201ENSMUST00000210883 159 ntBASIC14.96□□□□□ -0.01
Trav3-3Q5R1C3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav3-3Q5R1C3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav3-3Q5R1C3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav3-3Q5R1C3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav3-3Q5R1C3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav3-3Q5R1C3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-3Q5R1C3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-3Q5R1C3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Trav3-3Q5R1C3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-3Q5R1C3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-3Q5R1C3 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.95□□□□□ -0.02
Trav3-3Q5R1C3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-3Q5R1C3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-3Q5R1C3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC14.95□□□□□ -0.02
Trav3-3Q5R1C3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-3Q5R1C3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-3Q5R1C3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC14.95□□□□□ -0.02
Trav3-3Q5R1C3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-3Q5R1C3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-3Q5R1C3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-3Q5R1C3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-3Q5R1C3 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.95□□□□□ -0.02
Trav3-3Q5R1C3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-3Q5R1C3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-3Q5R1C3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-3Q5R1C3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-3Q5R1C3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-3Q5R1C3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-3Q5R1C3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-3Q5R1C3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms