Protein–RNA interactions for Protein: Q5NC48

Gm12253, Predicted gene 12253, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12253Q5NC48 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm12253Q5NC48 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm12253Q5NC48 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.33■□□□□ 0.36
Gm12253Q5NC48 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm12253Q5NC48 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm12253Q5NC48 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Gm12253Q5NC48 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.33■□□□□ 0.36
Gm12253Q5NC48 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Gm12253Q5NC48 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm12253Q5NC48 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm12253Q5NC48 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm12253Q5NC48 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm12253Q5NC48 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm12253Q5NC48 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm12253Q5NC48 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm12253Q5NC48 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm12253Q5NC48 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.32■□□□□ 0.36
Gm12253Q5NC48 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm12253Q5NC48 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm12253Q5NC48 Gm8495-201ENSMUST00000188740 694 ntBASIC17.32■□□□□ 0.36
Gm12253Q5NC48 Gm43017-201ENSMUST00000198296 752 ntBASIC17.32■□□□□ 0.36
Gm12253Q5NC48 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm12253Q5NC48 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.32■□□□□ 0.36
Gm12253Q5NC48 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm12253Q5NC48 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm12253Q5NC48 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Gm12253Q5NC48 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm12253Q5NC48 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm12253Q5NC48 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.32■□□□□ 0.36
Gm12253Q5NC48 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm12253Q5NC48 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm12253Q5NC48 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.31■□□□□ 0.36
Gm12253Q5NC48 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm12253Q5NC48 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm12253Q5NC48 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm12253Q5NC48 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm12253Q5NC48 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm12253Q5NC48 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Gm12253Q5NC48 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm12253Q5NC48 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm12253Q5NC48 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Gm12253Q5NC48 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.3■□□□□ 0.36
Gm12253Q5NC48 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm12253Q5NC48 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.3■□□□□ 0.36
Gm12253Q5NC48 Gm18284-201ENSMUST00000172604 624 ntBASIC17.3■□□□□ 0.36
Gm12253Q5NC48 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm12253Q5NC48 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm12253Q5NC48 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm12253Q5NC48 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm12253Q5NC48 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.3■□□□□ 0.36
Gm12253Q5NC48 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Gm12253Q5NC48 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm12253Q5NC48 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Gm12253Q5NC48 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Gm12253Q5NC48 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm12253Q5NC48 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm12253Q5NC48 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Gm12253Q5NC48 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm12253Q5NC48 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm12253Q5NC48 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm12253Q5NC48 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm12253Q5NC48 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm12253Q5NC48 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm12253Q5NC48 Gm43530-201ENSMUST00000195920 274 ntBASIC17.29■□□□□ 0.36
Gm12253Q5NC48 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Gm12253Q5NC48 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm12253Q5NC48 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.29■□□□□ 0.36
Gm12253Q5NC48 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm12253Q5NC48 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm12253Q5NC48 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm12253Q5NC48 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm12253Q5NC48 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Gm12253Q5NC48 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm12253Q5NC48 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm12253Q5NC48 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm12253Q5NC48 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm12253Q5NC48 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm12253Q5NC48 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm12253Q5NC48 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm12253Q5NC48 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm12253Q5NC48 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gm12253Q5NC48 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm12253Q5NC48 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm12253Q5NC48 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gm12253Q5NC48 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gm12253Q5NC48 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Gm12253Q5NC48 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.27■□□□□ 0.36
Gm12253Q5NC48 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gm12253Q5NC48 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm12253Q5NC48 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm12253Q5NC48 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gm12253Q5NC48 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm12253Q5NC48 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm12253Q5NC48 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm12253Q5NC48 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm12253Q5NC48 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm12253Q5NC48 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm12253Q5NC48 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm12253Q5NC48 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm12253Q5NC48 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms