Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.99■□□□□ 0.47
Rnf149Q3U2C5 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf149Q3U2C5 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf149Q3U2C5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf149Q3U2C5 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Rnf149Q3U2C5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf149Q3U2C5 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rnf149Q3U2C5 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.99■□□□□ 0.47
Rnf149Q3U2C5 Gm5812-201ENSMUST00000061073 957 ntBASIC17.99■□□□□ 0.47
Rnf149Q3U2C5 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf149Q3U2C5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf149Q3U2C5 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Rnf149Q3U2C5 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf149Q3U2C5 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf149Q3U2C5 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf149Q3U2C5 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf149Q3U2C5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf149Q3U2C5 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf149Q3U2C5 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf149Q3U2C5 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf149Q3U2C5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Rnf149Q3U2C5 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf149Q3U2C5 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Rnf149Q3U2C5 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.97■□□□□ 0.47
Rnf149Q3U2C5 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.97■□□□□ 0.47
Rnf149Q3U2C5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.97■□□□□ 0.47
Rnf149Q3U2C5 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.97■□□□□ 0.47
Rnf149Q3U2C5 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf149Q3U2C5 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.97■□□□□ 0.47
Rnf149Q3U2C5 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.97■□□□□ 0.47
Rnf149Q3U2C5 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.97■□□□□ 0.47
Rnf149Q3U2C5 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf149Q3U2C5 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf149Q3U2C5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.96■□□□□ 0.47
Rnf149Q3U2C5 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf149Q3U2C5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rnf149Q3U2C5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.96■□□□□ 0.47
Rnf149Q3U2C5 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf149Q3U2C5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf149Q3U2C5 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf149Q3U2C5 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf149Q3U2C5 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.96■□□□□ 0.47
Rnf149Q3U2C5 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.96■□□□□ 0.47
Rnf149Q3U2C5 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.96■□□□□ 0.47
Rnf149Q3U2C5 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf149Q3U2C5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf149Q3U2C5 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Rnf149Q3U2C5 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf149Q3U2C5 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Rnf149Q3U2C5 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rnf149Q3U2C5 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf149Q3U2C5 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf149Q3U2C5 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf149Q3U2C5 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.95■□□□□ 0.46
Rnf149Q3U2C5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf149Q3U2C5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf149Q3U2C5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf149Q3U2C5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.95■□□□□ 0.46
Rnf149Q3U2C5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf149Q3U2C5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Rnf149Q3U2C5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf149Q3U2C5 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf149Q3U2C5 Gm15546-201ENSMUST00000122095 826 ntBASIC17.94■□□□□ 0.46
Rnf149Q3U2C5 Gm15820-201ENSMUST00000201566 728 ntBASIC17.94■□□□□ 0.46
Rnf149Q3U2C5 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf149Q3U2C5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf149Q3U2C5 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.94■□□□□ 0.46
Rnf149Q3U2C5 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf149Q3U2C5 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.94■□□□□ 0.46
Rnf149Q3U2C5 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf149Q3U2C5 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.93■□□□□ 0.46
Rnf149Q3U2C5 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf149Q3U2C5 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf149Q3U2C5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Rnf149Q3U2C5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf149Q3U2C5 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.93■□□□□ 0.46
Rnf149Q3U2C5 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf149Q3U2C5 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.93■□□□□ 0.46
Rnf149Q3U2C5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf149Q3U2C5 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.93■□□□□ 0.46
Rnf149Q3U2C5 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf149Q3U2C5 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf149Q3U2C5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf149Q3U2C5 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf149Q3U2C5 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Rnf149Q3U2C5 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Rnf149Q3U2C5 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.92■□□□□ 0.46
Rnf149Q3U2C5 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf149Q3U2C5 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf149Q3U2C5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf149Q3U2C5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.91■□□□□ 0.46
Rnf149Q3U2C5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf149Q3U2C5 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf149Q3U2C5 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Rnf149Q3U2C5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf149Q3U2C5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf149Q3U2C5 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.91■□□□□ 0.46
Rnf149Q3U2C5 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf149Q3U2C5 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.91■□□□□ 0.46
Rnf149Q3U2C5 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 154.1 ms