Protein–RNA interactions for Protein: Q32KG4

Rtl9, Retrotransposon Gag-like protein 9, mousemouse

Predictions only

Length 1,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl9Q32KG4 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.31■■□□□ 1
Rtl9Q32KG4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rtl9Q32KG4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rtl9Q32KG4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Rtl9Q32KG4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Rtl9Q32KG4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rtl9Q32KG4 Gm43137-201ENSMUST00000198052 594 ntBASIC21.3■■□□□ 1
Rtl9Q32KG4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Rtl9Q32KG4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.3■■□□□ 1
Rtl9Q32KG4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Rtl9Q32KG4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rtl9Q32KG4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Rtl9Q32KG4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rtl9Q32KG4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rtl9Q32KG4 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.29■■□□□ 1
Rtl9Q32KG4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Rtl9Q32KG4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtl9Q32KG4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rtl9Q32KG4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Rtl9Q32KG4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Rtl9Q32KG4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rtl9Q32KG4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtl9Q32KG4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtl9Q32KG4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Rtl9Q32KG4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtl9Q32KG4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtl9Q32KG4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.28■■□□□ 1
Rtl9Q32KG4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.27■■□□□ 1
Rtl9Q32KG4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rtl9Q32KG4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rtl9Q32KG4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rtl9Q32KG4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rtl9Q32KG4 Gm6139-201ENSMUST00000079261 882 ntBASIC21.27■□□□□ 0.99
Rtl9Q32KG4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtl9Q32KG4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.26■□□□□ 0.99
Rtl9Q32KG4 Gm43530-201ENSMUST00000195920 274 ntBASIC21.26■□□□□ 0.99
Rtl9Q32KG4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Rtl9Q32KG4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rtl9Q32KG4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtl9Q32KG4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtl9Q32KG4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.25■□□□□ 0.99
Rtl9Q32KG4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtl9Q32KG4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtl9Q32KG4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
Rtl9Q32KG4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
Rtl9Q32KG4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.25■□□□□ 0.99
Rtl9Q32KG4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtl9Q32KG4 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.25■□□□□ 0.99
Rtl9Q32KG4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtl9Q32KG4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Rtl9Q32KG4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl9Q32KG4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Rtl9Q32KG4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl9Q32KG4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl9Q32KG4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl9Q32KG4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl9Q32KG4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl9Q32KG4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl9Q32KG4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl9Q32KG4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl9Q32KG4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl9Q32KG4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl9Q32KG4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rtl9Q32KG4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Rtl9Q32KG4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rtl9Q32KG4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
Rtl9Q32KG4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtl9Q32KG4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rtl9Q32KG4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtl9Q32KG4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rtl9Q32KG4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtl9Q32KG4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtl9Q32KG4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Rtl9Q32KG4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rtl9Q32KG4 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.22■□□□□ 0.99
Rtl9Q32KG4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Rtl9Q32KG4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtl9Q32KG4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtl9Q32KG4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtl9Q32KG4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.21■□□□□ 0.99
Rtl9Q32KG4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtl9Q32KG4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Rtl9Q32KG4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtl9Q32KG4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Rtl9Q32KG4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.21■□□□□ 0.99
Rtl9Q32KG4 Mir7075-201ENSMUST00000184187 82 ntBASIC21.21■□□□□ 0.99
Rtl9Q32KG4 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.21■□□□□ 0.99
Rtl9Q32KG4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
Rtl9Q32KG4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtl9Q32KG4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtl9Q32KG4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Rtl9Q32KG4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtl9Q32KG4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
Rtl9Q32KG4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtl9Q32KG4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Rtl9Q32KG4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.2■□□□□ 0.98
Rtl9Q32KG4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rtl9Q32KG4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rtl9Q32KG4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Rtl9Q32KG4 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms