Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ebf1Q07802 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.34■□□□□ 0.85
Ebf1Q07802 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.34■□□□□ 0.85
Ebf1Q07802 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ebf1Q07802 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ebf1Q07802 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ebf1Q07802 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ebf1Q07802 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ebf1Q07802 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ebf1Q07802 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ebf1Q07802 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ebf1Q07802 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ebf1Q07802 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.33■□□□□ 0.85
Ebf1Q07802 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Ebf1Q07802 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Ebf1Q07802 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.33■□□□□ 0.84
Ebf1Q07802 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ebf1Q07802 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ebf1Q07802 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ebf1Q07802 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.32■□□□□ 0.84
Ebf1Q07802 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ebf1Q07802 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ebf1Q07802 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.32■□□□□ 0.84
Ebf1Q07802 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.32■□□□□ 0.84
Ebf1Q07802 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.32■□□□□ 0.84
Ebf1Q07802 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ebf1Q07802 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ebf1Q07802 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ebf1Q07802 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ebf1Q07802 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ebf1Q07802 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ebf1Q07802 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ebf1Q07802 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ebf1Q07802 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Ebf1Q07802 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ebf1Q07802 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.31■□□□□ 0.84
Ebf1Q07802 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.31■□□□□ 0.84
Ebf1Q07802 Gm27405-201ENSMUST00000184201 112 ntBASIC20.31■□□□□ 0.84
Ebf1Q07802 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
Ebf1Q07802 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ebf1Q07802 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ebf1Q07802 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.3■□□□□ 0.84
Ebf1Q07802 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ebf1Q07802 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.3■□□□□ 0.84
Ebf1Q07802 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ebf1Q07802 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.3■□□□□ 0.84
Ebf1Q07802 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.3■□□□□ 0.84
Ebf1Q07802 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ebf1Q07802 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ebf1Q07802 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ebf1Q07802 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ebf1Q07802 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ebf1Q07802 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ebf1Q07802 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.29■□□□□ 0.84
Ebf1Q07802 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ebf1Q07802 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ebf1Q07802 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ebf1Q07802 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ebf1Q07802 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ebf1Q07802 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ebf1Q07802 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ebf1Q07802 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ebf1Q07802 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.29■□□□□ 0.84
Ebf1Q07802 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ebf1Q07802 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ebf1Q07802 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ebf1Q07802 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ebf1Q07802 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ebf1Q07802 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ebf1Q07802 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ebf1Q07802 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ebf1Q07802 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ebf1Q07802 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ebf1Q07802 Gm10849-201ENSMUST00000100397 618 ntBASIC20.27■□□□□ 0.84
Ebf1Q07802 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.27■□□□□ 0.84
Ebf1Q07802 Gm26571-201ENSMUST00000181399 666 ntBASIC20.27■□□□□ 0.84
Ebf1Q07802 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ebf1Q07802 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ebf1Q07802 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ebf1Q07802 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ebf1Q07802 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ebf1Q07802 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ebf1Q07802 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ebf1Q07802 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ebf1Q07802 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ebf1Q07802 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ebf1Q07802 Gm42569-201ENSMUST00000200539 472 ntBASIC20.26■□□□□ 0.83
Ebf1Q07802 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.26■□□□□ 0.83
Ebf1Q07802 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ebf1Q07802 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
Ebf1Q07802 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ebf1Q07802 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.25■□□□□ 0.83
Ebf1Q07802 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.25■□□□□ 0.83
Ebf1Q07802 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ebf1Q07802 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ebf1Q07802 Gm42642-201ENSMUST00000200683 355 ntBASIC20.25■□□□□ 0.83
Ebf1Q07802 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.25■□□□□ 0.83
Ebf1Q07802 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ebf1Q07802 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ebf1Q07802 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms