Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
IhhP97812 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
IhhP97812 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IhhP97812 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IhhP97812 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IhhP97812 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
IhhP97812 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
IhhP97812 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
IhhP97812 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
IhhP97812 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IhhP97812 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
IhhP97812 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IhhP97812 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
IhhP97812 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IhhP97812 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.05■□□□□ 0.96
IhhP97812 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.05■□□□□ 0.96
IhhP97812 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
IhhP97812 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IhhP97812 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IhhP97812 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IhhP97812 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IhhP97812 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.04■□□□□ 0.96
IhhP97812 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IhhP97812 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IhhP97812 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IhhP97812 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.04■□□□□ 0.96
IhhP97812 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
IhhP97812 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IhhP97812 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
IhhP97812 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IhhP97812 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
IhhP97812 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IhhP97812 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IhhP97812 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
IhhP97812 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IhhP97812 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
IhhP97812 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
IhhP97812 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.03■□□□□ 0.96
IhhP97812 Gm43173-201ENSMUST00000202246 593 ntBASIC21.03■□□□□ 0.96
IhhP97812 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
IhhP97812 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
IhhP97812 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.03■□□□□ 0.96
IhhP97812 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.03■□□□□ 0.96
IhhP97812 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
IhhP97812 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
IhhP97812 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
IhhP97812 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
IhhP97812 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
IhhP97812 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
IhhP97812 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
IhhP97812 Mir6236-201ENSMUST00000184437 123 ntBASIC21.02■□□□□ 0.96
IhhP97812 Serp2-204ENSMUST00000228055 705 ntBASIC21.02■□□□□ 0.96
IhhP97812 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
IhhP97812 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
IhhP97812 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
IhhP97812 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
IhhP97812 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
IhhP97812 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.01■□□□□ 0.95
IhhP97812 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.01■□□□□ 0.95
IhhP97812 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
IhhP97812 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
IhhP97812 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IhhP97812 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21■□□□□ 0.95
IhhP97812 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
IhhP97812 Spcs1-204ENSMUST00000226782 949 ntBASIC21■□□□□ 0.95
IhhP97812 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
IhhP97812 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IhhP97812 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IhhP97812 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.99■□□□□ 0.95
IhhP97812 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IhhP97812 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
IhhP97812 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
IhhP97812 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.99■□□□□ 0.95
IhhP97812 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IhhP97812 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IhhP97812 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
IhhP97812 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
IhhP97812 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
IhhP97812 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.98■□□□□ 0.95
IhhP97812 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.98■□□□□ 0.95
IhhP97812 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.98■□□□□ 0.95
IhhP97812 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IhhP97812 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.98■□□□□ 0.95
IhhP97812 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.98■□□□□ 0.95
IhhP97812 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.98■□□□□ 0.95
IhhP97812 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
IhhP97812 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
IhhP97812 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IhhP97812 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
IhhP97812 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
IhhP97812 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IhhP97812 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
IhhP97812 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IhhP97812 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.97■□□□□ 0.95
IhhP97812 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IhhP97812 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IhhP97812 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.96■□□□□ 0.95
IhhP97812 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
IhhP97812 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
IhhP97812 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms