Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx3-2P97503 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Nkx3-2P97503 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx3-2P97503 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.93■□□□□ 0.62
Nkx3-2P97503 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.93■□□□□ 0.62
Nkx3-2P97503 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx3-2P97503 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx3-2P97503 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx3-2P97503 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx3-2P97503 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx3-2P97503 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx3-2P97503 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx3-2P97503 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Nkx3-2P97503 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx3-2P97503 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Nkx3-2P97503 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx3-2P97503 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx3-2P97503 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Nkx3-2P97503 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.91■□□□□ 0.62
Nkx3-2P97503 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.91■□□□□ 0.62
Nkx3-2P97503 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx3-2P97503 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.91■□□□□ 0.62
Nkx3-2P97503 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx3-2P97503 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx3-2P97503 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx3-2P97503 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx3-2P97503 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx3-2P97503 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.91■□□□□ 0.62
Nkx3-2P97503 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx3-2P97503 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx3-2P97503 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Nkx3-2P97503 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Nkx3-2P97503 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx3-2P97503 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Nkx3-2P97503 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.9■□□□□ 0.62
Nkx3-2P97503 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx3-2P97503 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx3-2P97503 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx3-2P97503 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Nkx3-2P97503 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx3-2P97503 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx3-2P97503 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx3-2P97503 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx3-2P97503 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx3-2P97503 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx3-2P97503 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nkx3-2P97503 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx3-2P97503 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Nkx3-2P97503 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx3-2P97503 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Nkx3-2P97503 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx3-2P97503 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx3-2P97503 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx3-2P97503 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Nkx3-2P97503 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Nkx3-2P97503 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Nkx3-2P97503 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx3-2P97503 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx3-2P97503 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
Nkx3-2P97503 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx3-2P97503 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx3-2P97503 Mir7075-201ENSMUST00000184187 82 ntBASIC18.88■□□□□ 0.61
Nkx3-2P97503 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.88■□□□□ 0.61
Nkx3-2P97503 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx3-2P97503 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.88■□□□□ 0.61
Nkx3-2P97503 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.88■□□□□ 0.61
Nkx3-2P97503 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx3-2P97503 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx3-2P97503 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx3-2P97503 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx3-2P97503 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx3-2P97503 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx3-2P97503 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx3-2P97503 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.87■□□□□ 0.61
Nkx3-2P97503 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx3-2P97503 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx3-2P97503 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx3-2P97503 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx3-2P97503 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.87■□□□□ 0.61
Nkx3-2P97503 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Nkx3-2P97503 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx3-2P97503 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Nkx3-2P97503 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx3-2P97503 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx3-2P97503 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx3-2P97503 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx3-2P97503 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx3-2P97503 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.86■□□□□ 0.61
Nkx3-2P97503 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx3-2P97503 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx3-2P97503 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.86■□□□□ 0.61
Nkx3-2P97503 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx3-2P97503 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Nkx3-2P97503 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Nkx3-2P97503 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx3-2P97503 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Nkx3-2P97503 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Nkx3-2P97503 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Nkx3-2P97503 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx3-2P97503 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms